PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75923.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 581aa MW: 62877.7 Da PI: 7.3759

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47	6.4e-15	206	265	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g PON75923.1 206 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 265 57*****************666664477446***********************97 PP
2	AP2	47	6.3e-15	308	359	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PON75923.1 308 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 359 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MDSSSSTTTT SHPHPHHHQN WLAFSLSNHP SLFQTAAFTS PNNSAITTTT TTPAEDHHDA 60 SSTDLAMFTG SGGGAPKLED FLGGGGGCAT ASNVEPPLLC HHNTDNTNNQ FATDQTTVAS 120 LSSTAAEIYE SDLKTIAASF LRGFNSNISN NNNNNINNGG TILNIDQHID VNPSFHVATQ 180 PSLVVPVDPT AAAAKKTVDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ 240 VYLGGYDKEE KAARAYDLAA LKYWGLTTTT NFPVSNYEKE LVEMKNMTRQ EFVASLRRKS 300 SGFSRGASIY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY DIAAIKFRGL 360 NAVTNFDMNR YDVKSIANSN LPIGGMSNTK SKTSSDQSAD DHRDLISSAA SSVVTFAAPT 420 PQPASTLSFA IPIKQDPSSA SSASSSSADN SYWSNIFGFQ NPTSTTVPIS SLFHNKPNIS 480 SVLNPYNMDH YSATTTSTSV ASHESHGLNN VVGFFGTGTA TSVPYHNSYE TSNANSGYGI 540 SSWNNGNSDN NIGPTLHTFH HHHQARAKPA SLFQTPIFGM E

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MDSSSSTTTT SHPHPHHHQN WLAFSLSNHP SLFQTAAFTS PNNSAITTTT TTPAEDHHDA  60
SSTDLAMFTG SGGGAPKLED FLGGGGGCAT ASNVEPPLLC HHNTDNTNNQ FATDQTTVAS  120
LSSTAAEIYE SDLKTIAASF LRGFNSNISN NNNNNINNGG TILNIDQHID VNPSFHVATQ  180
PSLVVPVDPT AAAAKKTVDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ  240
VYLGGYDKEE KAARAYDLAA LKYWGLTTTT NFPVSNYEKE LVEMKNMTRQ EFVASLRRKS  300
SGFSRGASIY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY DIAAIKFRGL  360
NAVTNFDMNR YDVKSIANSN LPIGGMSNTK SKTSSDQSAD DHRDLISSAA SSVVTFAAPT  420
PQPASTLSFA IPIKQDPSSA SSASSSSADN SYWSNIFGFQ NPTSTTVPIS SLFHNKPNIS  480
SVLNPYNMDH YSATTTSTSV ASHESHGLNN VVGFFGTGTA TSVPYHNSYE TSNANSGYGI  540
SSWNNGNSDN NIGPTLHTFH HHHQARAKPA SLFQTPIFGM E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-140	AP2 family protein