PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON75565.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 629aa    MW: 71229.9 Da    PI: 6.4559
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON75565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS349.45.6e-1072536271374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cAeav+ +d e a +lL +++++as +g+  +Rla+yf++AL+ar+++ ++ely al++++ s     ++l++ +lf  ++P++k+s++  N
  PON75565.1 253 LRTLLTHCAEAVAGNDRETAIELLLQIRTNASVSGNGSHRLAHYFANALEARMNGIGNELYTALSAKRMS---ILTSLKSCRLFLSACPLIKLSNFFVN 348
                 6789************************************************************999998...99************************ PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++Ile +e+++++Hii f+i +G+QWp+++q L+ Rp+gpp lRiTg++ p +g   + +leetg+rLa++++++ vpfe+n+ +a+r+e +++e+L++
  PON75565.1 349 HTILELAEKANALHIIHFGIVYGFQWPSFIQRLSLRPGGPPLLRITGIDLPLPGfrPAARLEETGQRLANYCKRFSVPFEYNA-IAQRWEYISYEDLKI 446
                 ***************************************************99999***************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvs.leserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellgre 293
                 +++E ++Vn+ ++  +l+d++++ l+s rd+vL+l+ks++P+++++   +  +n++ F+ rf eal+y+s++fd+lea+ p+e  ++r+  E+e  g+e
  PON75565.1 447 DKDEITVVNSLYRFRYLPDDTATgLNSSRDSVLNLIKSIKPDIFIHGVVNGAYNASFFMSRFREALYYFSTVFDMLEANSPPELeQDRRLCEQEGHGKE 545
                 *******************998735669************************************************99888776699************ PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 i nv+aceg++r+er et+++W++r  +aG+ ++pl+++++ ++k  ++     + + ++e+s+++++gWk+r L+++S+W+
  PON75565.1 546 ILNVLACEGSKRIERPETYKQWHARNLRAGLLQLPLNKEIMRKVKEQMQSSCyHKDFFIDEDSQWMLQGWKGRVLYALSCWK 627
                 ********************************************998876544899*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 629 aa     Download sequence    
MRSHAEEEDA VLNSISQILL EEDLEEGTCV FPDATVEAAE RSFSDALGEK NSSEYRLITP  60
RNYALSQDIN IRCNTRSCNY NGSSSLNAVT AKNLDQPCLL NDVFSVHESR SYIPALPVIN  120
YNFQLGSTPL ADNMIFDFEG NSLIPLKLKE IFNVVSSEED KGKKQYEYFD SGLMKRKSLY  180
QLEIESSAGR RNKHLAGDDS ELSETFDMVL LSDGWLNGCT KMPSQSRSLS KGANIDGPTS  240
RKRRVGEGDL LDLRTLLTHC AEAVAGNDRE TAIELLLQIR TNASVSGNGS HRLAHYFANA  300
LEARMNGIGN ELYTALSAKR MSILTSLKSC RLFLSACPLI KLSNFFVNHT ILELAEKANA  360
LHIIHFGIVY GFQWPSFIQR LSLRPGGPPL LRITGIDLPL PGFRPAARLE ETGQRLANYC  420
KRFSVPFEYN AIAQRWEYIS YEDLKIDKDE ITVVNSLYRF RYLPDDTATG LNSSRDSVLN  480
LIKSIKPDIF IHGVVNGAYN ASFFMSRFRE ALYYFSTVFD MLEANSPPEL EQDRRLCEQE  540
GHGKEILNVL ACEGSKRIER PETYKQWHAR NLRAGLLQLP LNKEIMRKVK EQMQSSCYHK  600
DFFIDEDSQW MLQGWKGRVL YALSCWKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-152GRAS family protein