PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75559.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 690aa MW: 76026.5 Da PI: 8.7653

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75559.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.6	1.2e-07	591	640	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ PON75559.1 591 RRPFSVSEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 640 678999******************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MVLQKRLDYG FNGYQVPAMP RATRSARRRG TVRRRVEENQ MCAFDLLATV AGNLLLEKES 60 TPTSSNTSNQ KDKCSIVNQD EQDGNKTLKV EPCDQGSCDK NFFVSENVSH APNVNHSSKE 120 SSFPQNDDHS GFTSIMTTSN CTERLVAKNS DNGKIKNEVG SFCSQIEEGL SMYRESGGCE 180 LQGEAKTLVK DESNSTGKVL TGTVPDMCSS EYPAPFKGKP PAMPSSDSSP KAPLCGDHDP 240 LSLLPSHRDN VKVVSRDDDE NSSGCTHPST TSRYFKRASR IGDRRIRKIL ASKHWKFGSK 300 FKDETLSNPD GFIKPIYRSR KDCYKRQRAQ MNVPFKKRKL FDHSTVWTSD GGTNNHGFFN 360 STEKGIGDAS ASCPKLQGGT GKSCSVSGQH TSFQCRDSHV KLRIKSFRVP ELFIEIPETA 420 TVGSLKRTVM EAVTAILGGG LHIGVLLKGN KVRDDNITLL QSGISHDNQL DALGFTLEPN 480 LSQSPPPLCS GDSPHLLPGD APQLLARSPH NQDIVDHVSA NVPPESHVAC LGNLVESDHD 540 SAPSPTETSV DKSTTDSKAL VPVPAMSVEA LSVVPALRKS NRSEIAQRRI RRPFSVSEVE 600 ALVQAVEKLG TGRWRDVKLR AFDNAKHRTY VDLKDKWKTL VHTARISPQQ RRGEPVPQEL 660 LDRVLCAHAY WSQQQAKQQL KQQPETCLLL

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MVLQKRLDYG FNGYQVPAMP RATRSARRRG TVRRRVEENQ MCAFDLLATV AGNLLLEKES  60
TPTSSNTSNQ KDKCSIVNQD EQDGNKTLKV EPCDQGSCDK NFFVSENVSH APNVNHSSKE  120
SSFPQNDDHS GFTSIMTTSN CTERLVAKNS DNGKIKNEVG SFCSQIEEGL SMYRESGGCE  180
LQGEAKTLVK DESNSTGKVL TGTVPDMCSS EYPAPFKGKP PAMPSSDSSP KAPLCGDHDP  240
LSLLPSHRDN VKVVSRDDDE NSSGCTHPST TSRYFKRASR IGDRRIRKIL ASKHWKFGSK  300
FKDETLSNPD GFIKPIYRSR KDCYKRQRAQ MNVPFKKRKL FDHSTVWTSD GGTNNHGFFN  360
STEKGIGDAS ASCPKLQGGT GKSCSVSGQH TSFQCRDSHV KLRIKSFRVP ELFIEIPETA  420
TVGSLKRTVM EAVTAILGGG LHIGVLLKGN KVRDDNITLL QSGISHDNQL DALGFTLEPN  480
LSQSPPPLCS GDSPHLLPGD APQLLARSPH NQDIVDHVSA NVPPESHVAC LGNLVESDHD  540
SAPSPTETSV DKSTTDSKAL VPVPAMSVEA LSVVPALRKS NRSEIAQRRI RRPFSVSEVE  600
ALVQAVEKLG TGRWRDVKLR AFDNAKHRTY VDLKDKWKTL VHTARISPQQ RRGEPVPQEL  660
LDRVLCAHAY WSQQQAKQQL KQQPETCLLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-140	MYB_related family protein