PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON73877.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

CPP

Protein Properties

Length: 797aa MW: 88609.5 Da PI: 4.7413

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON73877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.8	6.8e-16	496	533	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCk+skClk+YCeCfaag +C e C+C+dC Nk PON73877.1 496 CKRCNCKRSKCLKLYCECFAAGLYCVEPCSCQDCLNKP 533 79**********************************96 PP
2	TCR	50.9	3e-16	598	637	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnC+ks ClkkYCeCf+ g+ Cs +C+C +CkN+ PON73877.1 598 RHKRGCNCRKSGCLKKYCECFQGGVGCSLSCRCMGCKNTF 637 589***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
MNVDEEEEEE VRQSKLNIWD SPVFNYISNL SPIEPVKSGH NNHTFSSLTF ASPPSLFTSP 60 QISSFSETRF AIRRHQFSDP SKPESSQSEY ESKTSEGAPV ATQSEQLECF NSGDSAREVT 120 NESSTENLEL AVEFPSTLRY DCGSPDGNLV PSDAVKMPEL ASTELSLVQF VADDSKEGNF 180 SFEREENLRG ICRVEENNGI AGCSWVKVVS ESNNIFGLDS PITGDHSDEQ EPRMVDSGTI 240 SFISNVLDDN LNDMGKTEFV CPTGSCEQFG MRESGVESEG IGDTRETDQT PAMLSSTLLN 300 KLVVSDSCDL VDDKRQKYIK SNCKPSSQLY RGIRRRSLVF ERTETHERIS ICESKGSSSV 360 SIQSNYKVAS ADNDLVENKN GCSSLSKLPG IGLHLNALTN TSDETIVKIE TRVSESPQTS 420 TPKMIFNTSL TSDEVPQDIC SSHNTLERAL VPWDDEAQVL ENAYQTSECL VGEEFDHGSP 480 RKKRRKSEPV GESLACKRCN CKRSKCLKLY CECFAAGLYC VEPCSCQDCL NKPIHENTVL 540 ETRKQIESRN PLAFAPKVIR SVDGVGEFGN GFSYESWYPF LARRYGEDDT KATPASARHK 600 RGCNCRKSGC LKKYCECFQG GVGCSLSCRC MGCKNTFGQK DGMEETEFDE PKLETYEKLV 660 MDVSLETFKD QDLLITSSEI SRPPNEQQPN LIRKILLPSI PSVESSHQFG NRENPEKITL 720 ESHLQMIPED GTLETLESSC QQTRSGVKST SPNSKRVSPP YREFGSLTAR RSGRKLILRS 780 IPAYPQLSTD HESSDFP

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

MNVDEEEEEE VRQSKLNIWD SPVFNYISNL SPIEPVKSGH NNHTFSSLTF ASPPSLFTSP  60
QISSFSETRF AIRRHQFSDP SKPESSQSEY ESKTSEGAPV ATQSEQLECF NSGDSAREVT  120
NESSTENLEL AVEFPSTLRY DCGSPDGNLV PSDAVKMPEL ASTELSLVQF VADDSKEGNF  180
SFEREENLRG ICRVEENNGI AGCSWVKVVS ESNNIFGLDS PITGDHSDEQ EPRMVDSGTI  240
SFISNVLDDN LNDMGKTEFV CPTGSCEQFG MRESGVESEG IGDTRETDQT PAMLSSTLLN  300
KLVVSDSCDL VDDKRQKYIK SNCKPSSQLY RGIRRRSLVF ERTETHERIS ICESKGSSSV  360
SIQSNYKVAS ADNDLVENKN GCSSLSKLPG IGLHLNALTN TSDETIVKIE TRVSESPQTS  420
TPKMIFNTSL TSDEVPQDIC SSHNTLERAL VPWDDEAQVL ENAYQTSECL VGEEFDHGSP  480
RKKRRKSEPV GESLACKRCN CKRSKCLKLY CECFAAGLYC VEPCSCQDCL NKPIHENTVL  540
ETRKQIESRN PLAFAPKVIR SVDGVGEFGN GFSYESWYPF LARRYGEDDT KATPASARHK  600
RGCNCRKSGC LKKYCECFQG GVGCSLSCRC MGCKNTFGQK DGMEETEFDE PKLETYEKLV  660
MDVSLETFKD QDLLITSSEI SRPPNEQQPN LIRKILLPSI PSVESSHQFG NRENPEKITL  720
ESHLQMIPED GTLETLESSC QQTRSGVKST SPNSKRVSPP YREFGSLTAR RSGRKLILRS  780
IPAYPQLSTD HESSDFP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	482	486	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	8e-95	CPP family protein