PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON72835.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 633aa MW: 71099 Da PI: 5.905

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON72835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.1	1.3e-10	572	624	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg....kgRtlkqcksrwqk 46 r +WT+eE+++l+++v+++ + W++I + kgRt ++k++w + PON72835.1 572 RVPWTAEEEQKLKEGVQMFSDKrntPWRKILESSShvfkKGRTSSDLKDKWKN 624 789***************999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MDDMVASEST LAWVWVIEAV ASFKEVDLSL LQDLVKAAPE IPDDLAKNAK EMVALKCLET 60 LFAPPHNEIT SDVPSTQGLK VGFDFSQSCE DVLKRILQES SVPQLSNWDI YPFLSHKRAC 120 MKKCSLVELK EAILDGTHPY ADFLREKSGL AFPNRAELNT NDYSRDSVTS RPNTTCSDIQ 180 YMRAGVNSDP LTVENMSKQL GEKLHSGGTL HSKRASLDLN ADSNGKDGSD QSEQNPVPLL 240 GKEPLEDLSE RDVSVTEREL DLAENQMGGV EHGGILKDGP KKCSVTKISQ NSNTDEFHKI 300 LLKINSNAPV MRQGITRDET YQYLSVDKTN VVREENVCMK RNEAGQMLVC STNNCQCVHE 360 KCLDSPPRFD DNGSFYCPLC AYCSLDITDC LEPKKKCNVA NKKLSAFIHM ALENLPRGFS 420 DTGQNRDEDH RGKNIENEHL REREDNEGYH GEPIANEANN LNVSIVVEEY KERVVKGCLS 480 VRSFEGKQKE VSGNKDGASA KNTHMVLFNQ GKAIQQEVQK EQNTDAPKKP IYELDVDGMG 540 ISEDDNYESP TRFHKKESHC TILATPQLKR KRVPWTAEEE QKLKEGVQMF SDKRNTPWRK 600 ILESSSHVFK KGRTSSDLKD KWKNMCKGIP KSK

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MDDMVASEST LAWVWVIEAV ASFKEVDLSL LQDLVKAAPE IPDDLAKNAK EMVALKCLET  60
LFAPPHNEIT SDVPSTQGLK VGFDFSQSCE DVLKRILQES SVPQLSNWDI YPFLSHKRAC  120
MKKCSLVELK EAILDGTHPY ADFLREKSGL AFPNRAELNT NDYSRDSVTS RPNTTCSDIQ  180
YMRAGVNSDP LTVENMSKQL GEKLHSGGTL HSKRASLDLN ADSNGKDGSD QSEQNPVPLL  240
GKEPLEDLSE RDVSVTEREL DLAENQMGGV EHGGILKDGP KKCSVTKISQ NSNTDEFHKI  300
LLKINSNAPV MRQGITRDET YQYLSVDKTN VVREENVCMK RNEAGQMLVC STNNCQCVHE  360
KCLDSPPRFD DNGSFYCPLC AYCSLDITDC LEPKKKCNVA NKKLSAFIHM ALENLPRGFS  420
DTGQNRDEDH RGKNIENEHL REREDNEGYH GEPIANEANN LNVSIVVEEY KERVVKGCLS  480
VRSFEGKQKE VSGNKDGASA KNTHMVLFNQ GKAIQQEVQK EQNTDAPKKP IYELDVDGMG  540
ISEDDNYESP TRFHKKESHC TILATPQLKR KRVPWTAEEE QKLKEGVQMF SDKRNTPWRK  600
ILESSSHVFK KGRTSSDLKD KWKNMCKGIP KSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	2e-06	MYB_related family protein