PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON71986.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

GRF

Protein Properties

Length: 496aa MW: 53428.7 Da PI: 8.6533

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON71986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.2	1.7e-24	119	162	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 daepgrC+RtDGKkWRCsr+v +++k+CErH++rgrsrsrk++e PON71986.1 119 DAEPGRCKRTDGKKWRCSRDVAPDQKYCERHMNRGRSRSRKHVE 162 79****************************************98 PP
2	QLQ	51.7	2.6e-18	59	93	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT aQl +L++Q+ +yKy+aa++PvP+eLl++ + PON71986.1 59 PFTSAQLKELERQAVIYKYMAASVPVPHELLLPFT 93 8******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MMMILIIKLI TTVNFNPPKE PSHNTCYSPS TTTTNTTTAV SYNALKSPRG AMAAFVGFPF 60 TSAQLKELER QAVIYKYMAA SVPVPHELLL PFTRNLSASA VSHYPFGSEF KVRFSNGRDA 120 EPGRCKRTDG KKWRCSRDVA PDQKYCERHM NRGRSRSRKH VEVQINNNNN NNNKRTRHDN 180 SNSNQHALSA LSSSATLATN SNISHNHFLG SSPALPYHPS PVFESVASLS ADKDGRSLEW 240 MMKREAVAMA ASDPRWLHLM QTRMEIPLKP SFCDTNNASI FSHHAEEEPF LNLNSYARFG 300 TGGVGGDEQD RECGLFLDPE AVALDNQTNS ETPRSFIDAW SKTGMEETMV HSTGGVNQSS 360 VSLQGKLSPS SLTLSMGGSS SINGEMGRTQ MVTGFNGSDT KSRITSWLTP APWVASRPGG 420 PLAEVLRPSS VTATTSAASD PSSPFAGYGD PGSPPATAVS SPSGVLQKTV ASLSDSSGCS 480 SPALASSKVN AEIALL

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MMMILIIKLI TTVNFNPPKE PSHNTCYSPS TTTTNTTTAV SYNALKSPRG AMAAFVGFPF  60
TSAQLKELER QAVIYKYMAA SVPVPHELLL PFTRNLSASA VSHYPFGSEF KVRFSNGRDA  120
EPGRCKRTDG KKWRCSRDVA PDQKYCERHM NRGRSRSRKH VEVQINNNNN NNNKRTRHDN  180
SNSNQHALSA LSSSATLATN SNISHNHFLG SSPALPYHPS PVFESVASLS ADKDGRSLEW  240
MMKREAVAMA ASDPRWLHLM QTRMEIPLKP SFCDTNNASI FSHHAEEEPF LNLNSYARFG  300
TGGVGGDEQD RECGLFLDPE AVALDNQTNS ETPRSFIDAW SKTGMEETMV HSTGGVNQSS  360
VSLQGKLSPS SLTLSMGGSS SINGEMGRTQ MVTGFNGSDT KSRITSWLTP APWVASRPGG  420
PLAEVLRPSS VTATTSAASD PSSPFAGYGD PGSPPATAVS SPSGVLQKTV ASLSDSSGCS  480
SPALASSKVN AEIALL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	3e-35	GRF family protein