PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70995.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 470aa MW: 52958 Da PI: 10.1811

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70995.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.1	3.6e-07	8	38	2	32
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg 32 g W t+E++ll av ++G+++W+t+a+++ PON70995.1 8 GEWGTWEELLLGGAVLRHGTRDWDTVAAELR 38 78**************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
METEEVGGEW GTWEELLLGG AVLRHGTRDW DTVAAELRPR ALISPFNFTA QMCKAKYEDL 60 QQRYSGCTNN IKRIHFDSTF VRAWFEELRM KRMAELRQAL ELSEDSIGSL ETKLETLKAD 120 KGGGTRVNYA SSQKESPVTS QKSEGFESFS KESKDGLSAG SFTLETRTSW SADQCPIPSA 180 VSTDETETKP EVLRTSEVAK MSIIEKLEEY VNERQGGILK KRRGKRKRKD CSKEIKDSVG 240 ESDFLDSAEP IIAFRSKENS TCDCGEDSGS SHLDNKIKET KTDGIDDLLK VFNSIVKHKC 300 ACTFRHRLDS QKRGRYKKMI RKHMDLDTLR SRITGRSIMS VEELFRDLLL LTNNALVFYS 360 KTTREHKSAM LLRDLTTKTL RQHFNDSRNT KAASANLSVI TTIHSSPLVK PQSVHPGNRN 420 LPGKTANSKI NDVAKSPKTG SAQPKRVGRK SNNTQQTVTP VKGRKRGRIR

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

METEEVGGEW GTWEELLLGG AVLRHGTRDW DTVAAELRPR ALISPFNFTA QMCKAKYEDL  60
QQRYSGCTNN IKRIHFDSTF VRAWFEELRM KRMAELRQAL ELSEDSIGSL ETKLETLKAD  120
KGGGTRVNYA SSQKESPVTS QKSEGFESFS KESKDGLSAG SFTLETRTSW SADQCPIPSA  180
VSTDETETKP EVLRTSEVAK MSIIEKLEEY VNERQGGILK KRRGKRKRKD CSKEIKDSVG  240
ESDFLDSAEP IIAFRSKENS TCDCGEDSGS SHLDNKIKET KTDGIDDLLK VFNSIVKHKC  300
ACTFRHRLDS QKRGRYKKMI RKHMDLDTLR SRITGRSIMS VEELFRDLLL LTNNALVFYS  360
KTTREHKSAM LLRDLTTKTL RQHFNDSRNT KAASANLSVI TTIHSSPLVK PQSVHPGNRN  420
LPGKTANSKI NDVAKSPKTG SAQPKRVGRK SNNTQQTVTP VKGRKRGRIR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	219	226	LKKRRGKR
2	220	225	KKRRGK
3	222	230	RRGKRKRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	1e-23	MYB_related family protein