PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70809.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 407aa MW: 47418 Da PI: 5.1914

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	66.4	5.8e-21	127	217	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt+qe+ +Li+a++e++ +l+rg lk +Weev+ + + ++s++qC++k+e+l++ry+++k++ + sss +pyfd ++ PON70809.1 127 WTHQETVHLIQAYEEKWYSLKRGPLKSSQWEEVAVTVaarcgyDYTEPSKSAIQCRHKMEKLRQRYRAEKQRLLGLDGVSSSAWPYFDLMD 217 *********************************998666665666689********************99999999****998 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MVSPEQLIWR GSKSQNPRFC CNLGDFVLFF FGSDLQTLYL YFTVCHLTEL LNWSNQNCPN 60 WHTHYRRNPK QGPPHSTHHS STAATKTPPI NTLTITLFSY SPPNTQKPPP FMATPPPSAK 120 KPQPIPWTHQ ETVHLIQAYE EKWYSLKRGP LKSSQWEEVA VTVAARCGYD YTEPSKSAIQ 180 CRHKMEKLRQ RYRAEKQRLL GLDGVSSSAW PYFDLMDRLE RGPLPISARP MIAPPYRCYP 240 DQDHENDDDD DDNDDDDDDD DDDDEDEDGE YFAKSRSIDY ILRRPTMVNR FAGVGKLSNG 300 FSRVWAESVP VAKRRRESVE EEEEEDEDEN DDILGRRRGR DREREAVLEL AKEIRAFSER 360 IVGMESMKME IIKDTERCRR EMETKRIDMI LRSQNKIVDS ITKAFEI

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MVSPEQLIWR GSKSQNPRFC CNLGDFVLFF FGSDLQTLYL YFTVCHLTEL LNWSNQNCPN  60
WHTHYRRNPK QGPPHSTHHS STAATKTPPI NTLTITLFSY SPPNTQKPPP FMATPPPSAK  120
KPQPIPWTHQ ETVHLIQAYE EKWYSLKRGP LKSSQWEEVA VTVAARCGYD YTEPSKSAIQ  180
CRHKMEKLRQ RYRAEKQRLL GLDGVSSSAW PYFDLMDRLE RGPLPISARP MIAPPYRCYP  240
DQDHENDDDD DDNDDDDDDD DDDDEDEDGE YFAKSRSIDY ILRRPTMVNR FAGVGKLSNG  300
FSRVWAESVP VAKRRRESVE EEEEEDEDEN DDILGRRRGR DREREAVLEL AKEIRAFSER  360
IVGMESMKME IIKDTERCRR EMETKRIDMI LRSQNKIVDS ITKAFEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24860.1	2e-48	Trihelix family protein