PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON70762.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family ARF
Protein Properties Length: 952aa    MW: 104909 Da    PI: 4.8735
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON70762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B378.47.3e-25147248199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        + ++++ ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv a++L++gD+v+F   ++++ +l
  PON70762.1 147 FCKILTASDTSTHGGFSVPRRAAEKLfppldytM-QPPN-QELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGAKRLRAGDSVLFI--RDEKSQL 241
                 99*********************999*****954.5444.49************************************************..4577778 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +v+++r+
  PON70762.1 242 MVGIRRA 248
                 *****97 PP
2Auxin_resp112.63.7e-37273356183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+++s+F+++YnPra+++eFv+++ k++ka++ +++svGmRf m+fete+s +rr++Gt+vg+s+ldp+rWp+SkWr+L+
  PON70762.1 273 AAHAAANRSTFTIFYNPRACPAEFVIPLTKFRKAVYaTHLSVGMRFGMMFETEESGKRRYMGTIVGISELDPLRWPGSKWRNLQ 356
                 79*********************************9899*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 952 aa     Download sequence    
MGSVEEKIKN GGLVTGAPTN LLEEMKMLKE MQDQNGSRKT ISSELWHACA GPLVSLPQVG  60
SLVYYFPQGH SEQVAVSTKK TATSQIPNYP NLPSQLLCQV QNVTLHADRE TDEIYAQMSL  120
QPVNSEKDVF PVPDFGLKPS KHPSEFFCKI LTASDTSTHG GFSVPRRAAE KLFPPLDYTM  180
QPPNQELVVR DLHENTWTFR HIYRGQPKRH LLTTGWSLFV GAKRLRAGDS VLFIRDEKSQ  240
LMVGIRRANR QQSTLPSSVL SADSMHIGVL AAAAHAAANR STFTIFYNPR ACPAEFVIPL  300
TKFRKAVYAT HLSVGMRFGM MFETEESGKR RYMGTIVGIS ELDPLRWPGS KWRNLQVEWD  360
EPGCCDKQNR VSSWEIETPE SLFIFPSLTS GLKRPFHPGY LETDWGNYIK RSFIRVPENG  420
NGDFPYSISS LYSEQLMKML LKPQLVNYPG TLSSLQQESA AAKADPLRDV KLMQAALNQK  480
DQVICSESMS LQQNQVNPQS SLDQSCVSNL NASPNANLHG NFNTAAKLEK QNAGAVVSSE  540
KAKSETELSP DQLSQLTTTT VHSSEDKLAA GLVNPQGLVN QLTLLNQIQN QGPVQLQTNQ  600
WALQPQLESL LYLSQQTDLN PSDMTNTNVS LPSLDPDECM FYPSCHPYPA GILRSPGSLP  660
VFGFQDSSAF PETNNLPLPS MGQDMWDNSN LKVQAEQLTS FAQQEPCNFN SISNSSSLRD  720
LSDESNNQSG IYSCPNIDGS NGGSMVVDPS VSSTILDEFS TLKNVDFQNP SDCLVGNFST  780
SQDVQSQITS ASLGDSQAFS RQDIQDNSGG TSSSNVDLDD SSLLRNNNSW QQGVPPVRTY  840
TKVQKAGSVG RSIDVSSFKN YDELCSAIEC MFGLEGLLND PRGSGWKLVY VDYENDVLLV  900
GDDPWEEFVG CVRCIRILSP SEVQQMSEEG MQLLNSAAMQ GMNGSITESG RA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein