PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69117.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 413aa MW: 46288.2 Da PI: 5.98

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.2	2.2e-16	81	170	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +k++++s+v +l lpkkf++++ +k ++ +++ledesg++ e k+ + + l++GW+ F a++L egD+vvF+l++ +++v ++r+ PON69117.1 81 VKTMLHSHVCVGFWLGLPKKFCDSYL-PK-QDSMMVLEDESGEVCEAKY--LAEK--VGLSGGWRAFSLAHKLVEGDVVVFHLVS--PLKFKVYIVRS 170 69999******************4.33.4559***********..4444..55*********************986..55558888775 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MAVAQQIQAP SHSSPQKVKR GRPPKKQGKQ QVCSKPMKSE SNERKRAMVE SLYDDPKARS 60 SIMERAYEVQ ANLDPELPSL VKTMLHSHVC VGFWLGLPKK FCDSYLPKQD SMMVLEDESG 120 EVCEAKYLAE KVGLSGGWRA FSLAHKLVEG DVVVFHLVSP LKFKVYIVRS NCSDEVDCAL 180 GLLKLEANMK QETKSLEPLL LDNPVNNIQM TISSASDQSD KDSDDIRPEV LDGLRLSESV 240 ISFEEVRNIG DFNILINGLI INSELPKCFL AKYYELCCSQ KTYLHEHFLE GLNCKLVVGV 300 ISETINIADG IRASKLTSSV DDFATWDKTL KAFEGLGMNV GFLRARLDQL ASLASKSKRY 360 ENVRVDREEL RDLEAKISVV KEKMIRLSTE LEALGTNSQE LQLMFQEVAS ASW

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MAVAQQIQAP SHSSPQKVKR GRPPKKQGKQ QVCSKPMKSE SNERKRAMVE SLYDDPKARS  60
SIMERAYEVQ ANLDPELPSL VKTMLHSHVC VGFWLGLPKK FCDSYLPKQD SMMVLEDESG  120
EVCEAKYLAE KVGLSGGWRA FSLAHKLVEG DVVVFHLVSP LKFKVYIVRS NCSDEVDCAL  180
GLLKLEANMK QETKSLEPLL LDNPVNNIQM TISSASDQSD KDSDDIRPEV LDGLRLSESV  240
ISFEEVRNIG DFNILINGLI INSELPKCFL AKYYELCCSQ KTYLHEHFLE GLNCKLVVGV  300
ISETINIADG IRASKLTSSV DDFATWDKTL KAFEGLGMNV GFLRARLDQL ASLASKSKRY  360
ENVRVDREEL RDLEAKISVV KEKMIRLSTE LEALGTNSQE LQLMFQEVAS ASW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	6e-41	B3 family protein