PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON67486.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HD-ZIP

Protein Properties

Length: 317aa MW: 35827.6 Da PI: 4.5307

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON67486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.4	2.4e-18	85	138	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q++ Le+ Fe ++++ e++ +LAk+lgL+ rqV +WFqNrRa++k PON67486.1 85 KKRRLSTTQVQFLEKNFELENKLEPERKLKLAKELGLQPRQVAIWFQNRRARYK 138 556899***********************************************9 PP
2	HD-ZIP_I/II	124	7e-40	85	176	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrls+ qv++LE++Fe e+kLeperK +la+eLglqprqva+WFqnrRAR+k+kqlEk+y++Lk+++d+lk++ ++L ke e+L++e+++ PON67486.1 85 KKRRLSTTQVQFLEKNFELENKLEPERKLKLAKELGLQPRQVAIWFQNRRARYKSKQLEKEYDSLKASFDRLKSDYDNLLKEGETLKNEVNS 176 9**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MASGKVYRAS NMAILLQEER LPPNSEVLKS LWIPSSSSSF QGSKSMVSFE NGSKGDSTDG 60 SFFEQLDRDE NGDDDCDGCF HQPGKKRRLS TTQVQFLEKN FELENKLEPE RKLKLAKELG 120 LQPRQVAIWF QNRRARYKSK QLEKEYDSLK ASFDRLKSDY DNLLKEGETL KNEVNSLKEK 180 LVVKEKGSKE NSENAEPENP TLKAVSETVS NAVMGVCKQE DASSAKSDVF DSDSPHYAEN 240 YCSMLEPADS SHVFEPADHS DFSQDEDDTN NLMSQSLFPP PLPCFPKLEA CYYDGTPASS 300 CNFGFQVEDQ SFNFWPY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	114	KKRRLSTTQVQFLEKNFELENKLEPERKLK
2	133	141	RRARYKSKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	4e-34	HD-ZIP family protein