PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON66641.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | GeBP | ||||||||
Protein Properties | Length: 239aa MW: 27970.6 Da PI: 7.8215 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 73.4 | 4.3e-23 | 51 | 140 | 6 | 97 |
DUF573 6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 l+s++D+i+lLqGli f +k+gk+ + ++y+ +kks+ ++s +ql + r+ +Kf +++ k+ +g +p+f+++hdqk++elsk+iWg PON66641.1 51 LFSQDDQILLLQGLIAFSEKHGKN--RNFAEIYDVIKKSLPPNMSMKQLRRQVSRMERKFVDHELKKCDGGSPTFANPHDQKVYELSKIIWG 140 6*********************76..89*************************************99************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence |
MDDTDHYNSI VPDSADDYER PSEKKAKLTA EEKMKQVDDA HQLKQASQII LFSQDDQILL 60 LQGLIAFSEK HGKNRNFAEI YDVIKKSLPP NMSMKQLRRQ VSRMERKFVD HELKKCDGGS 120 PTFANPHDQK VYELSKIIWG NSTTTSTTTT TTNTTVVHED HRLQDSDDID TPLSFVLKDF 180 VTHNGLDLNW VEESKRKHLA RMWKKYKIAE CNYFHVRAKF QDMMHHVKMQ VYNRELARQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G11510.1 | 1e-11 | GeBP family protein |