PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66549.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 785aa MW: 89740.1 Da PI: 6.8788

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	3e-07	566	598	2	35
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgR 35 ++WT++E + +++++k++G++ Wk+ +++++k+R PON66549.1 566 QKWTAQEYDYILKYHKEHGSE-WKKLSKHLNKHR 598 79*****************.******9554 PP

Sequence ? help Back to Top
Protein Sequence Length: 785 aa Download sequence
MGEKMREKKG HESEKHREKT IEVENGEKEL EKAKKKKNKV VDNDGKTSNV VEALKTTCVE 60 REEGTNVDAT GGKDFDSLEE KKENKKMHKE EKKNKKKKKE GVDGISSLGE NFEHDKMFEL 120 VKGQGHNKYC QESPVVDSEV ERAEEKKEEV VDKISLLGEN VEAEKMNELV KEQGNNNNGL 180 DIPVVNSEAK HDEKKKKKEK KKKKKDGADA ISSLGEDVED DKMNDLVKGR EYKKNCQDIP 240 VVNSEIEEAG KTKKRKREKK DGDNVDKNIV TDLQKLSEKR NHSDGKINEG SKLAVKEKST 300 DKVLEDNEMG EVAKAQKGTE SGDITETNYN KEGGKSKKKK KKRKRETASA DLEEIIANEP 360 GTESTRIRDC ENVEYGDNVG STEDNLHEGC TDVHATDAYE GKKAQLAKLG KGDDCSKDKK 420 KKAKVEKQVS DGKCHKGKPR TKKDSETNDS SENPTQQGKS KRVSFSDSVE IFSSSNGPSW 480 SQKKQVEGLV RGKRFTPEED EKVKEAVFGY IEECGLGDDG LNMVLNCKQY PEVKNCWKYI 540 AASISWRPHD SVYYRAHILF ERDENQKWTA QEYDYILKYH KEHGSEWKKL SKHLNKHRIH 600 VKDTFRRINR TSLNKGRWSQ DEYQNLFDLV NKDLRIRASE EKKSKHGMLR DNICWGAISE 660 KLSSRHCAAC CMKWYQQLTS SMVAEGLWVD TDDYRLLDAL SNLDAACIED VDWDNLLEHR 720 DGDICRKRWN QMVKHIGEYG NNKSFSEQVE ILSERYSLDV LEAREEYDSK EPVDLIVNNS 780 DDSAL

Sequence ? help Back to Top

Protein Sequence Length: 785 aa Download sequence

MGEKMREKKG HESEKHREKT IEVENGEKEL EKAKKKKNKV VDNDGKTSNV VEALKTTCVE  60
REEGTNVDAT GGKDFDSLEE KKENKKMHKE EKKNKKKKKE GVDGISSLGE NFEHDKMFEL  120
VKGQGHNKYC QESPVVDSEV ERAEEKKEEV VDKISLLGEN VEAEKMNELV KEQGNNNNGL  180
DIPVVNSEAK HDEKKKKKEK KKKKKDGADA ISSLGEDVED DKMNDLVKGR EYKKNCQDIP  240
VVNSEIEEAG KTKKRKREKK DGDNVDKNIV TDLQKLSEKR NHSDGKINEG SKLAVKEKST  300
DKVLEDNEMG EVAKAQKGTE SGDITETNYN KEGGKSKKKK KKRKRETASA DLEEIIANEP  360
GTESTRIRDC ENVEYGDNVG STEDNLHEGC TDVHATDAYE GKKAQLAKLG KGDDCSKDKK  420
KKAKVEKQVS DGKCHKGKPR TKKDSETNDS SENPTQQGKS KRVSFSDSVE IFSSSNGPSW  480
SQKKQVEGLV RGKRFTPEED EKVKEAVFGY IEECGLGDDG LNMVLNCKQY PEVKNCWKYI  540
AASISWRPHD SVYYRAHILF ERDENQKWTA QEYDYILKYH KEHGSEWKKL SKHLNKHRIH  600
VKDTFRRINR TSLNKGRWSQ DEYQNLFDLV NKDLRIRASE EKKSKHGMLR DNICWGAISE  660
KLSSRHCAAC CMKWYQQLTS SMVAEGLWVD TDDYRLLDAL SNLDAACIED VDWDNLLEHR  720
DGDICRKRWN QMVKHIGEYG NNKSFSEQVE ILSERYSLDV LEAREEYDSK EPVDLIVNNS  780
DDSAL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	194	205	KKKKKEKKKKKK
2	197	205	KKEKKKKKK
3	253	260	KKRKREKK
4	337	345	KKEKKKKKK
5	337	343	KKKKKKR
6	338	344	KKKKKKR
7	339	345	KKKKKKR
8	339	344	KKKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-115	MYB_related family protein