PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66032.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARF

Protein Properties

Length: 1130aa MW: 126182 Da PI: 6.4756

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.6	1e-22	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae++ + +++ ++l +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ +l PON66032.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldysM-QPPA-QELAARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDEKSQL 220 99***************************954.5444.38**********************************************..4567778 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ PON66032.1 221 LLGIRRA 227 9999997 PP
2	Auxin_resp	122.1	4.2e-40	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv++++k++ka++++vs+GmRf+m+fete+s rr++Gtv+g++dld++rW+nS+Wr+L+ PON66032.1 252 AAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTVTGITDLDSLRWKNSQWRNLQ 334 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1130 aa Download sequence
MKAPPNGFLA NSGEGERKSI NSELWHACAG PLVSLPPVGS LVIYFPQGHS EQVAASMQKE 60 TDFIPNYPNL PSKLICMLHN VTLHADPETD EVYAQLTLQP VNKHDREPLL ASDMGLKQNR 120 QPAEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDYSMQ PPAQELAARD LHDNTWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIRRATRQ QPALSSSVIS 240 SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYNKAMYTQV SLGMRFRMMF 300 ETEESGVRRY MGTVTGITDL DSLRWKNSQW RNLQVGWDES TAGERPSRVS LWEIEPVVTP 360 FYICPPPFFR PKFLKQPGMP DDESEMENAF KRAMPWLGDD FGMKDAASTI FPGLSLVQWM 420 NMQQNNQFSA AQSGFFPSMV SSAGMNNPSI DDPSKLLSFQ APVMSGTSVP LNKATPSNQV 480 NQVQQPPVTW PQQQQQQLHQ LLQNPVNQQQ QNYSQQQQQL QQLLQTPPNQ QLQNHPQQQQ 540 LPQQRLQHQH QELPQHQQLQ QQQQQTHQQP QQQQICQPLL NNGVGSNNPI PNQNLQQPVM 600 FSQHQQQQLV TGNTQSQQNG YSSKNSNQLT SLPMDSFQQQ MEMQPSLFQK QQQPAPLQQN 660 PIQFLQQNLT QRTQQQPQLQ QPSQQGLSEQ QLHLQLLQKL QQQQQQQQLL SPTSSLLQPQ 720 LLPQQQGNQQ NQQLQSSPLS QHQQPLNSNS FSTEKLLNIN NFSTSTLTQS QPIPTSQPQS 780 QQKPLVAIRA NSSLTDGDAP SCSTSPSTNN CQISPSNLLN RNQQGPAMLV GDPVVEPASS 840 LVQELQSKSD IRIKHELPSS KGLDQLKYKG TITDQLEASS SGASYLDAST IQQSFPLPTF 900 SLDGDVQSNQ RNNLAFGVNI DGLTPDTLLS RGYDSQKDLQ NLLSNCGGAP RDIETEFSTA 960 GISSQSFGVP NMPFKPGCSS DAAINDAGVL NNGLWANQTQ RMRTYTKVQK RGSVGRCIDV 1020 TRYKGYDELR HDLARMFGIE GQLEDPQRTD WKLVYVDHEN DILLVGDDPW QEFVSCVQSI 1080 KILSSAEVQQ MSLDGDLGQV PVPNQACSGT DSGNAWRGQY DDTSAASFNR

Sequence ? help Back to Top

Protein Sequence Length: 1130 aa Download sequence

MKAPPNGFLA NSGEGERKSI NSELWHACAG PLVSLPPVGS LVIYFPQGHS EQVAASMQKE  60
TDFIPNYPNL PSKLICMLHN VTLHADPETD EVYAQLTLQP VNKHDREPLL ASDMGLKQNR  120
QPAEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDYSMQ PPAQELAARD LHDNTWTFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKSQL LLGIRRATRQ QPALSSSVIS  240
SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYNKAMYTQV SLGMRFRMMF  300
ETEESGVRRY MGTVTGITDL DSLRWKNSQW RNLQVGWDES TAGERPSRVS LWEIEPVVTP  360
FYICPPPFFR PKFLKQPGMP DDESEMENAF KRAMPWLGDD FGMKDAASTI FPGLSLVQWM  420
NMQQNNQFSA AQSGFFPSMV SSAGMNNPSI DDPSKLLSFQ APVMSGTSVP LNKATPSNQV  480
NQVQQPPVTW PQQQQQQLHQ LLQNPVNQQQ QNYSQQQQQL QQLLQTPPNQ QLQNHPQQQQ  540
LPQQRLQHQH QELPQHQQLQ QQQQQTHQQP QQQQICQPLL NNGVGSNNPI PNQNLQQPVM  600
FSQHQQQQLV TGNTQSQQNG YSSKNSNQLT SLPMDSFQQQ MEMQPSLFQK QQQPAPLQQN  660
PIQFLQQNLT QRTQQQPQLQ QPSQQGLSEQ QLHLQLLQKL QQQQQQQQLL SPTSSLLQPQ  720
LLPQQQGNQQ NQQLQSSPLS QHQQPLNSNS FSTEKLLNIN NFSTSTLTQS QPIPTSQPQS  780
QQKPLVAIRA NSSLTDGDAP SCSTSPSTNN CQISPSNLLN RNQQGPAMLV GDPVVEPASS  840
LVQELQSKSD IRIKHELPSS KGLDQLKYKG TITDQLEASS SGASYLDAST IQQSFPLPTF  900
SLDGDVQSNQ RNNLAFGVNI DGLTPDTLLS RGYDSQKDLQ NLLSNCGGAP RDIETEFSTA  960
GISSQSFGVP NMPFKPGCSS DAAINDAGVL NNGLWANQTQ RMRTYTKVQK RGSVGRCIDV  1020
TRYKGYDELR HDLARMFGIE GQLEDPQRTD WKLVYVDHEN DILLVGDDPW QEFVSCVQSI  1080
KILSSAEVQQ MSLDGDLGQV PVPNQACSGT DSGNAWRGQY DDTSAASFNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein