PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON64972.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 568aa    MW: 64438.6 Da    PI: 5.1004
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON64972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS319.85.9e-981935641374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svsely.kalppsetseknsseelaalkl.fsevsPilkfshl 96 
                 lvelLl+cAe v  +++e+ ++lL++  +l+s++g+p+qR+++yf eAL++r+ + ++ +++ ++l+ ++ ++++   +l+a+++ f++  P+ ++s +
  PON64972.1 193 LVELLLSCAEKVGCEQFERGSKLLNQCYQLCSNSGNPVQRVVHYFCEALRERIDKeTGRNIAlSSLTQQQFDPDKAMMTLNAQHYaFHQEVPFSQLSLF 291
                 689***************************************************95555554256677777888888888888878************* PP

        GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                 +  qaI e v++++++HiiD++i  GlQW  L+qaLas   ++   l+iT++g    +sk+ +eetgerL++fA+++++p++f++l++++++ l  + +
  PON64972.1 292 AGLQAIIENVAEAKKIHIIDLGIRSGLQWTVLMQALASSHeSQLELLKITALGT---TSKHLIEETGERLSSFAKTMNIPLSFKILMVSDMSHLIEDLF 387
                 *************************************66637778*********...6899*********************************88888 PP

        GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                 +++ +E++aV +++ l r+l+e+ +les    v+++++sl+P v+vv+e ea+hns+ F++rf+eal yy alfd+le+ + r++e+r+  E  ++g+ 
  PON64972.1 388 ELDADEKVAVYSSFLLRRFLSEPDQLES----VMNVIRSLNPCVMVVIEVEANHNSPFFVNRFIEALFYYGALFDCLETFMKRDDENRMISESLYFGQG 482
                 ********************99999999....******************************************************************* PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 i+n+va+eg++r+ rh t   Wr+ + ++G++ ++ls++   qakl+++k++ +    ++ + ++l+  Wk+ p++s+S+W+
  PON64972.1 483 IRNIVATEGKQRKIRHVTIDVWRSFFARFGMEGAELSSSSLYQAKLIIQKFScEASCALDVNAKCLIVRWKGTPILSLSVWK 564
                 ****************************************************8888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    
MEEVNSEYQV HSYGGEKWRD SRATDYLSPD FGCHQDDIPN EGFLFSKYQL KEQQEEKILD  60
YELLNDTRVD IDSPPLETCL EEIAKLGEIP PVISDVEAKK KKGCPISLAA LELLKNYGGG  120
VKKMKGERVK EPCNDKTSNE ANKLSTDEIL RIAGTRFIQS SSQPADHVPS MLSHPFESSF  180
YGLSYEESKD VELVELLLSC AEKVGCEQFE RGSKLLNQCY QLCSNSGNPV QRVVHYFCEA  240
LRERIDKETG RNIALSSLTQ QQFDPDKAMM TLNAQHYAFH QEVPFSQLSL FAGLQAIIEN  300
VAEAKKIHII DLGIRSGLQW TVLMQALASS HESQLELLKI TALGTTSKHL IEETGERLSS  360
FAKTMNIPLS FKILMVSDMS HLIEDLFELD ADEKVAVYSS FLLRRFLSEP DQLESVMNVI  420
RSLNPCVMVV IEVEANHNSP FFVNRFIEAL FYYGALFDCL ETFMKRDDEN RMISESLYFG  480
QGIRNIVATE GKQRKIRHVT IDVWRSFFAR FGMEGAELSS SSLYQAKLII QKFSCEASCA  540
LDVNAKCLIV RWKGTPILSL SVWKFVKY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199125KKKKGCPISLAALELLKNYGGGVKKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.18e-63GRAS family protein