PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON64971.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 602aa    MW: 67826.9 Da    PI: 4.5102
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON64971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2921.6e-892266001374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl....fsevsPilkfs 94 
                 lvelLl+ Ae v  ++ e a++lL+    l  s +g+p+qR++ yf eAL++r+ r++ ++ ++   ++  + ++++++++  +    f++  P+ ++ 
  PON64971.1 226 LVELLLASAEKVGGQQYESASRLLNFFDYLaPSDTGNPVQRVVYYFIEALKERIDRETGRTTSKGLGKNLGSFDMDKAMMVPDApklaFHQGLPFSQVE 324
                 689***************************567777********************55555555544444445555555555445558*********** PP

        GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                  ++  qaI e v+++++vH+iD+ i +G+QW+aL+qaLasR+e+ p   +++T+v+    +sk+ +eetg+ L++fA++l++pf f++++++++ +l+ 
  PON64971.1 325 KFAGIQAIIENVSESNKVHVIDLRIANGVQWIALMQALASRREDCPieLFKVTAVAT---TSKHVMEETGKWLSNFADTLKIPFTFKIVMVSDMFELKE 420
                 ******************************************98887789*******...689************************************ PP

        GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
                 + ++++++E++aV ++++l  + +++++les    ++++++sl+P v+vv+e +a+hns+ F++rf+eal +y +lfdsle+ + r++ +r+ vE ++ 
  PON64971.1 421 DLFELDEDETIAVYSSYALRGMISQPAQLES----LMRVIRSLNPCVMVVTEVDANHNSPVFVNRFIEALFFYGTLFDSLESFMNRNEPNRMAVEGKYC 515
                 ***********************99999999....**************************************************************** PP

        GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++i+n+va+eg+er+ r+ +   Wr+ + ++G+++++ls +   qakl+++ ++ +d  ++  + +++++gWk+ p +s+S+W+
  PON64971.1 516 FQAIRNIVATEGEERTIRNVKIDVWRAFFARFGMEELKLSPSSIYQAKLIVKSFPcGDSCTLGMNGKCMMIGWKGTPHTSLSVWK 600
                 ************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    
MDFLFNSIFS SGDISFEGID QDKFSSTDRS LNNSMDNVQF YGVEEYGGNP VGIHSLYPDY  60
GYCPDEYLGE GFILSKSQLQ DQQQQQQSFS VYELFDDIPQ YGLVLPPFVA CLEDITKPGE  120
IPTVIPDVEA KKDEEYPFSL AVLELLNNHV NGFKRLSGER VIQPSNDVTT FNDCQGAADY  180
RTLSTEEILR FAGARFIQSY SQQTASHPFD GSFSGLSQEQ TKDVELVELL LASAEKVGGQ  240
QYESASRLLN FFDYLAPSDT GNPVQRVVYY FIEALKERID RETGRTTSKG LGKNLGSFDM  300
DKAMMVPDAP KLAFHQGLPF SQVEKFAGIQ AIIENVSESN KVHVIDLRIA NGVQWIALMQ  360
ALASRREDCP IELFKVTAVA TTSKHVMEET GKWLSNFADT LKIPFTFKIV MVSDMFELKE  420
DLFELDEDET IAVYSSYALR GMISQPAQLE SLMRVIRSLN PCVMVVTEVD ANHNSPVFVN  480
RFIEALFFYG TLFDSLESFM NRNEPNRMAV EGKYCFQAIR NIVATEGEER TIRNVKIDVW  540
RAFFARFGME ELKLSPSSIY QAKLIVKSFP CGDSCTLGMN GKCMMIGWKG TPHTSLSVWK  600
FL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.11e-48GRAS family protein