PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64535.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WOX

Protein Properties

Length: 272aa MW: 29481.8 Da PI: 6.9464

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64535.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.7	1.3e-15	32	92	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ PON64535.1 32 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 92 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.3	9.5e-35	31	94	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q PON64535.1 31 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 94 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MDQDQVQDRP NSPTNGSEIR NSTSSTTEPA VRSRWTPKPE QILILESIFN SGMVNPPKDE 60 TVRIRKLLEK FGSVGDANVF YWFQNRRSRS RRRQRQLQAQ LNNIGGAIQY ESSNSTTATS 120 TTPAAAMAGF GGGSAYSFLS SPSNSSYLMG GCSSSKSCGG LGDDHGHVEN SFFQVSGGQM 180 GFPEIEQNSA VTSVLYPPDS SNMHFQLSGF VTVFINGVPT EVPKGPIDLK PMFGQDVILV 240 HSSGVPVPTN DFGILLQSLQ RGESYFLVPR AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	7e-34	WOX family protein