PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62741.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 633aa    MW: 69316 Da    PI: 5.3551
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62741.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS457.29.7e-1402646231374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv++L++cAeav++++l+ a+al+++++ la +++ +m+++a++f++ALa+r++r    ly    p++  +++ ++ l++   f+e++P+lkf+h+taN
  PON62741.1 264 LVHALMACAEAVQQNNLSIAEALVKQINYLAMSQAGAMRKVATFFAQALARRIYR----LY----PETPLDHSLADFLQM--HFYETCPYLKFAHFTAN 352
                 689****************************************************....44....444444446666555..5**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p++++++ l+e+g++La++Ae+++v+fe++ +va++l+dl+ ++L+++p
  PON62741.1 353 QAILEAFQGKKRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAPDNSDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRP 451
                 *************************************************************************************************** PP

        GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                    E++aVn+v++lh+ll +++++e+    vL++vk+++P++v+vveqea+hn++ Fl+rf+e+l+yys+lfdsle ++   + +++++++++lg++i 
  PON62741.1 452 seVESVAVNSVFELHKLLGRPGAIEK----VLSVVKQMKPEIVTVVEQEANHNGHVFLDRFTESLHYYSTLFDSLEGSV---NGQDKVMSEVYLGKQIA 543
                 88899*******************99....************************************************7...99*************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nvvaceg +r+erhetl++Wr r+++aGF+p++l+++a kqa++ll+ ++ +dgyrvee+sg+l+lgW++rpL+++SaW+
  PON62741.1 544 NVVACEGPDRVERHETLAQWRTRMDSAGFSPAHLGSNAFKQASMLLALFAgGDGYRVEENSGCLLLGWHTRPLIATSAWQ 623
                 *******************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    
MKREHPNQSR RLHNPRSDPS MDASSSGAGA GGYVSGSNPT TAGKASKMWE DECQQDGVMD  60
ELLAVLGYKV KSSDMADVAQ KLEQLEEAMC SVQQDNLSQL ASDTVHYNPS DLSTWLETML  120
TELNPPPNFD SVMAAPFHPP PPQPQPQRKS IEDPFLAPAE SSTITSIDFP DQRNQSSIVL  180
EDSSSSDYDL KAIPGKAIYS QATSSQFESS SSRETKRLKP SPGSTSSDLF ASNSSMPGAY  240
NDVAAAADSS RPVLVDSQEN GIRLVHALMA CAEAVQQNNL SIAEALVKQI NYLAMSQAGA  300
MRKVATFFAQ ALARRIYRLY PETPLDHSLA DFLQMHFYET CPYLKFAHFT ANQAILEAFQ  360
GKKRVHVIDF SMNQGMQWPA LMQALALRPG GPPAFRLTGI GPPAPDNSDH LQEVGWKLAQ  420
LAETIHVEFE YRGFVANSLA DLDASMLELR PSEVESVAVN SVFELHKLLG RPGAIEKVLS  480
VVKQMKPEIV TVVEQEANHN GHVFLDRFTE SLHYYSTLFD SLEGSVNGQD KVMSEVYLGK  540
QIANVVACEG PDRVERHETL AQWRTRMDSA GFSPAHLGSN AFKQASMLLA LFAGGDGYRV  600
EENSGCLLLG WHTRPLIATS AWQLAGRRPG VAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein