PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62366.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 503aa MW: 55136.1 Da PI: 6.3012

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.4e-17	165	214	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PON62366.1 165 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 214 78*****************......55**********************997 PP
2	AP2	41.1	4.4e-13	257	307	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g PON62366.1 257 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 307 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MLDLNLNVHS ADSSAQNEDS SSMLLEKIPQ GSGTQMDESG TSNSSIVNAD ASSNGGDDES 60 CSARAGGNEV YTFDFDILKV GGTENDVAVV TKELFPMGGG NGDFKDWRVQ SSSSSRKNWI 120 ELGFDQSGAG EVRMIQQEPQ PQLQPQPQQQ QPAKKSRRGP RSRSSQYRGV TFYRRTGRWE 180 SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FNLSDYEDDL KQLKNLTKEE 240 FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KYIYLGLFDS EVEAARAYDK 300 AAIKCNGREA VTNFEPSTYE GDMNSEASNE GENHNLDLNL GISTPSFGNG QKESEGRIQF 360 HPGPYEMHSR KLLGMENHTS VTLSDPPFKG LVMTPEQPLV LNGVYPSFFP SEERATEKRI 420 ALGSSQGLPA WQMHGQVTAT PVPLFSTAAS SGFSFSAAPP SAAILPSKPL DPATLNLCFT 480 SSATAATHSS QYYYQLKPPQ APP

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MLDLNLNVHS ADSSAQNEDS SSMLLEKIPQ GSGTQMDESG TSNSSIVNAD ASSNGGDDES  60
CSARAGGNEV YTFDFDILKV GGTENDVAVV TKELFPMGGG NGDFKDWRVQ SSSSSRKNWI  120
ELGFDQSGAG EVRMIQQEPQ PQLQPQPQQQ QPAKKSRRGP RSRSSQYRGV TFYRRTGRWE  180
SHIWDCGKQV YLGGFDTAHA AARAYDRAAI KFRGVDADIN FNLSDYEDDL KQLKNLTKEE  240
FVHILRRQST GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KYIYLGLFDS EVEAARAYDK  300
AAIKCNGREA VTNFEPSTYE GDMNSEASNE GENHNLDLNL GISTPSFGNG QKESEGRIQF  360
HPGPYEMHSR KLLGMENHTS VTLSDPPFKG LVMTPEQPLV LNGVYPSFFP SEERATEKRI  420
ALGSSQGLPA WQMHGQVTAT PVPLFSTAAS SGFSFSAAPP SAAILPSKPL DPATLNLCFT  480
SSATAATHSS QYYYQLKPPQ APP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-135	AP2 family protein