PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON62182.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WOX

Protein Properties

Length: 412aa MW: 46883.1 Da PI: 7.8923

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON62182.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.1	5.4e-22	102	161	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ PON62182.1 102 SRWNPTPEQLRALEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 161 7***************99************************************97 PP
2	Wus_type_Homeobox	114.8	4.1e-37	101	163	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ PON62182.1 101 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 163 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MWMMGYNEGG EVNLHDPFNA TSRKLRPLIP RPLQPSANTS SQNITNPNPP FLSRNSHDFF 60 AQYHHLASTN VGHHQNHHND YHQNMMMSKR ELNIGQQVVV SSRWNPTPEQ LRALEELYRR 120 GTRTPSAEQI QHITAQLRRY GKIEGKNVFY WFQNHKARER QKRRRQIMES SPADDLEMSD 180 IQKNNTNKET SLGACRTGFG FEVEQTKNWP PSTNCSSTSL AEDSHVSIQR AAKAAVGAES 240 CRTDGWTQFG EGELQHRRNF MERNATWQTM QLSCPPPLPA CHVINTPTTV TTTTTTTTSN 300 GSSCRTASAP MRTMGQRLIK NTNTNHYDLS IFKTTPYREE NGNALINTSD LNRPELDHDE 360 SQTLELFPLR SGDYTNEKET EISVVSAMSY STSDITTNVT PCPFFEFLPL KN

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MWMMGYNEGG EVNLHDPFNA TSRKLRPLIP RPLQPSANTS SQNITNPNPP FLSRNSHDFF  60
AQYHHLASTN VGHHQNHHND YHQNMMMSKR ELNIGQQVVV SSRWNPTPEQ LRALEELYRR  120
GTRTPSAEQI QHITAQLRRY GKIEGKNVFY WFQNHKARER QKRRRQIMES SPADDLEMSD  180
IQKNNTNKET SLGACRTGFG FEVEQTKNWP PSTNCSSTSL AEDSHVSIQR AAKAAVGAES  240
CRTDGWTQFG EGELQHRRNF MERNATWQTM QLSCPPPLPA CHVINTPTTV TTTTTTTTSN  300
GSSCRTASAP MRTMGQRLIK NTNTNHYDLS IFKTTPYREE NGNALINTSD LNRPELDHDE  360
SQTLELFPLR SGDYTNEKET EISVVSAMSY STSDITTNVT PCPFFEFLPL KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	3e-59	WOX family protein