PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON61178.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 280aa    MW: 30649.7 Da    PI: 7.5025
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON61178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17183217135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  PON61178.1 183 CTHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 217
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MSAQADCFGI DDLLDLPNDD HFFSSSSSDS DPHHHHHHHH HHCLPPLLPQ TSSSASASAS  60
THFINTPQHD FTSDLCVPSD DVAELEWLSR FVDDSFSDLP AGEIAGALTF PNDASFSGRA  120
SSKRSRFPAA ASASGRGGNT GWGSLSSTTT TTTTAELESP VVAKPKSKQR EASPVSSGGT  180
RRCTHCASEK TPQWRTGPMG PKTLCNACGV RYKSGRLVPE YRPAASPTFV LTQHSNSHRK  240
VMELRRQKEL IRQQQQPEEG QRHQQGQFYS HSHRHGFQVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.14e-73GATA family protein