PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON60891.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 311aa MW: 35136.5 Da PI: 6.9208

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON60891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.6	6.6e-14	11	56	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde l++ v+++G+++W++I ++ ++Rt+k+c++rw + PON60891.1 11 KGPWKAEEDEVLINHVRKYGPRDWSSIRSKGLLRRTGKSCRLRWVN 56 79***********************888779*********87 PP
2	Myb_DNA-binding	41.7	2.7e-13	67	106	3	44
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +++ eE+ +++ +q+G++ W++Ia +++ gRt++++k++w PON60891.1 67 KFSLEEERVVIELQAQFGNK-WARIATYLP-GRTDNDVKNFW 106 799***************.*****.********* PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MEGNREEGIR KGPWKAEEDE VLINHVRKYG PRDWSSIRSK GLLRRTGKSC RLRWVNKLRP 60 NLKNGCKFSL EEERVVIELQ AQFGNKWARI ATYLPGRTDN DVKNFWSSRQ KRLARILQTS 120 PNSSKSQKSK GDGPSYHEVP TFEARNFSSS SGESSSKVLP RSSSCIQNSD MIKMVPLPDL 180 VNPSKLVNFD QDLGHQPEFN TTEKNLCIGS QPLIPFPPAL KSQPDLTFSS ESEDHLARFG 240 DPYFDVFGTL DALKLGNEAE LSFGPPFLEP TESCRTGGAI EKFDTTPDVF FDDFPVDMFD 300 QIELLPKSSQ Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	2e-75	MYB family protein