PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON60882.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 305aa    MW: 33813.9 Da    PI: 7.786
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON60882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox573.3e-18136190256
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 rk+ ++tkeq  +Lee F+++++++ +++  LAk+l+L  rqV vWFqNrRa+ k
  PON60882.1 136 RKKLRLTKEQSVVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 190
                 78889************************************************98 PP
2HD-ZIP_I/II126.79.8e-41136225191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  +kk+rl+keq+ +LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
   PON60882.1 136 RKKLRLTKEQSVVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVHELR-AL 225
                  69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MAENDDGLGL SLSLGCGATQ PSLKLNLMQK PSPPMQYHHQ KTTPWNEIFQ LSTDRNSDAR  60
SFLRGLDVNR TPPSATALAA ADYDDENGVS SPNSTVSSLS GKRSEREPVG DEIENERDSC  120
SRGSDDEDGG GGDNSRKKLR LTKEQSVVLE ETFKEHNTLN PKQKLALAKQ LNLRPRQVEV  180
WFQNRRARTK LKQTEVDCEY LKRCCENLTE ENRRLQKEVH ELRALKLSPQ LYMHMSPPTT  240
LTMCPSCERV AVSSTSSSTA ASSVPASTVP NWQPAVSGIP RPVPINPWAA LPIQHRPLDT  300
PASRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135141SRKKLRL
2185193RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.12e-71HD-ZIP family protein