PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON60861.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 240aa MW: 26277.8 Da PI: 5.1441 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.3 | 1.2e-20 | 134 | 184 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++GVr+++ +g+++AeIrdp++ng kr++lg++ t+e+Aa a+++a+ k++g+ PON60861.1 134 FRGVRRRP-WGKYAAEIRDPTKNG--KRIWLGTYETPEDAALAYDRAAFKIRGA 184 8*******.***********9998..*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MSGSSVLVSS SDESADFALL EAISQHLLRD DRFDDLSTPF NPSIYSQTSS SSSNLFLAAT 60 ANDHQSCWMT TTHDFPPFEG NDPDDTSFFF GANPGGSSSD DGSTDDFFEE AVEDLPVMAA 120 RVSNAPPSKG KISFRGVRRR PWGKYAAEIR DPTKNGKRIW LGTYETPEDA ALAYDRAAFK 180 IRGAKAKLNF PHLIGSETWE PIRITPKRRF TESQSSSSIS SENGSPSPKR RHGVASPETI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 6e-45 | ERF family protein |