PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON60852.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family ERF
Protein Properties Length: 233aa    MW: 26202.3 Da    PI: 6.2563
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON60852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-17110160255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng   r++lg++  a++Aa a+++a+ k++g
  PON60852.1 110 HYRGVRRRP-WGKYAAEIRDPAKNG--SRVWLGTYERADDAALAYDRAAFKIRG 160
                 69*******.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MYGSELESSD FVLLDSIYHY LLDDTVPLVL SSSSEDGGAP ILTSQSSTSF DNGLVFAENY  60
PELPFKLPKD EYYSEDMLAH ISPDSRGKAT DDHSDVAVAH EMQAPRSVMH YRGVRRRPWG  120
KYAAEIRDPA KNGSRVWLGT YERADDAALA YDRAAFKIRG SKAKLNFPHL IGSDCVNYEP  180
VRVKPKRRRL FQELNNGNGS PVLLSKRNRT VPEVDSVVFN SVSWVEESEV IKK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186190KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.15e-35ERF family protein