PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON60851.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 24953.6 Da PI: 7.0612 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.3e-20 | 92 | 143 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+++AeIrdp++ng +r++lg++ tae+Aa a+++a+ +++g PON60851.1 92 TRFRGVRRRP-WGKYAAEIRDPKKNG--ARVWLGTYETAEDAALAYDRAAFQIRG 143 589*******.***********9998..***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MSRSRSRTRT RSLIMTDSDY ALLDSIRLHL LEDDFNFNPN ATLFSASLGI NSISITPTPP 60 SGRDAGTPVL LLNEAEATEH HAPPAASDEV GTRFRGVRRR PWGKYAAEIR DPKKNGARVW 120 LGTYETAEDA ALAYDRAAFQ IRGSKAKLNF PHLIGSDHSQ LSRVTPKRRS PEPEPSSTSD 180 DCSGSGSGKR TRGSIDACGN TTQVKAELDE SDWLSFSQME TLNNDSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 7e-31 | ERF family protein |