PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON59844.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 27142.3 Da PI: 6.777 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.5e-18 | 23 | 73 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g PON59844.1 23 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 73 59*****998.**********9...336************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MVKIEKKMEQ NPLKPTPLTA GKKKYKGVRM RSWGSWVSEI RAPNQKTRIW LGSYSTAEAA 60 ARAYDAALLC LKGSSANLNF PLSSSTLSSH QNIPNDVVLS PKSIQRVAAA AANTTSNFVN 120 DNNNTNNNNK NIVASITAAT SPSPSSSPTS SSSSMVHSPF DQLDDDVSLM GSLGSHTGMN 180 NRYDDQQLGI GNIDLQSRAM MEAWCNFDGL QSPKYVDQML FNGSTSLFDP QIMEDPYEES 240 DIRLWSFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77640.1 | 6e-34 | ERF family protein |