PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON59399.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

E2F/DP

Protein Properties

Length: 375aa MW: 42375.8 Da PI: 8.4569

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON59399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	67.5	1.7e-21	18	83	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rkeksL++l+++flkl+++ g++ l+++a++L v +rRR YD++N+Le ++++++k+kn+++wkg PON59399.1 18 RKEKSLGVLCSNFLKLYNRDGVGAIGLDDAASQL---GV--ERRRMYDVVNILEIVGVVARKAKNQYTWKG 83 79***************999********.....****************************98 PP
2	E2F_TDP	66.3	3.9e-21	142	220	2	70
E2F_TDP 2 keksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwk 70 ++ksL lltq+f+kl+ +s+++ + l+++ak L + ++k+RR+YDi+NVL+++nliek + k+++rw PON59399.1 142 RDKSLSLLTQNFIKLFLCSDADLILLDNAAKGLPGDaddatVLRTKVRRLYDIANVLSSINLIEKirhpdSGKPAYRWL 220 79*****************************777999997899******************99999****6 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MSSILSLESE TRPSVYCRKE KSLGVLCSNF LKLYNRDGVG AIGLDDAASQ LGVERRRMYD 60 VVNILEIVGV VARKAKNQYT WKGLGEIPRA LEQLKEEGLR ENFNASLCYS RILNDNEHRG 120 LLSLNSGEED HSSVSSKSKN KRDKSLSLLT QNFIKLFLCS DADLILLDNA AKGLPGDADD 180 ATVLRTKVRR LYDIANVLSS INLIEKIRHP DSGKPAYRWL CWSGKPKNEI DTSDINDSNE 240 PKKRAFGTDV TNCNFKRKRE VTAVDCKSNQ ETGRQTNTKS TELEQHEYDG EEVKQHPKHA 300 SRGIVFGPFA PVSMPKVGDA ANKNMRQDQN WESLASTYRP QYRNQALCDL FSHYMEAWKS 360 WFVDAVGTQK MQQIC

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MSSILSLESE TRPSVYCRKE KSLGVLCSNF LKLYNRDGVG AIGLDDAASQ LGVERRRMYD  60
VVNILEIVGV VARKAKNQYT WKGLGEIPRA LEQLKEEGLR ENFNASLCYS RILNDNEHRG  120
LLSLNSGEED HSSVSSKSKN KRDKSLSLLT QNFIKLFLCS DADLILLDNA AKGLPGDADD  180
ATVLRTKVRR LYDIANVLSS INLIEKIRHP DSGKPAYRWL CWSGKPKNEI DTSDINDSNE  240
PKKRAFGTDV TNCNFKRKRE VTAVDCKSNQ ETGRQTNTKS TELEQHEYDG EEVKQHPKHA  300
SRGIVFGPFA PVSMPKVGDA ANKNMRQDQN WESLASTYRP QYRNQALCDL FSHYMEAWKS  360
WFVDAVGTQK MQQIC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	242	259	KKRAFGTDVTNCNFKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01330.1	1e-109	E2F/DP family protein