PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON58827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | WRKY | ||||||||
Protein Properties | Length: 243aa MW: 27135.7 Da PI: 7.4204 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.2 | 1.4e-32 | 169 | 227 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ PON58827.1 169 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHS 227 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MEGERSGGSV VPISYELQVS FSAATPTPVP IHEMGFVQFE DHHHHHDDHH NVYSFLAPSS 60 HQSTGQLSSS AVAQPLTAGS TSTAAAASNS AMGFCHGDLV GRPSWNNNEQ MVGTLDPKAV 120 NDENCTGNAS DGSNSWWRSS SADKNKVKVR RKLREPRFCF QTRSDVDVLD DGYKWRKYGQ 180 KVVKNSLHPR SYYRCTHSNC RVKKRVERLS EDCRMVITTY EGRHNHSPSD DSNSSEHECF 240 SSF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 154 | KVRRKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44745.1 | 3e-57 | WRKY family protein |