PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57290.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 267aa    MW: 29586.5 Da    PI: 6.7977
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57290.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002186108123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  PON57290.1  86 FSCNYCQRKFYSSQALGGHQNAH 108
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MEIQKQEDQD HDHQQDNTEV HRGLVLDLSL PKSHSDHGSK PELNFIDCFD TANSSKDSSD  60
EISPEHDHED TDQSGININE SEPRVFSCNY CQRKFYSSQA LGGHQNAHKR ERTLAKRGHK  120
VVGATAYGIP SINSFPYRYS SLASLPLHGS FNRSLGIQVH SMIHKPSFQP NVSSSSGTIG  180
SSQLYGHNGW LRLPIGQQPA VGRLEPEVFR VAGEAGGYSS SSSGGPARFE GVRRFSPVGH  240
EEIGGFWWNS SKNKQDEMQK LDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.13e-38C2H2 family protein