PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57050.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 294aa    MW: 32122 Da    PI: 6.6247
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00022102124123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C  C + F++   L  H+++H
  PON57050.1 102 YTCAFCRREFRSAQALGGHMNVH 124
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MATELGLLSL THLHKLAQSQ DNQTQNQNQN QIQNHHQLNP NTLTTPSTFT TTTATTAPTP  60
WMWNPKNHHH HNQDAEEDSW EVRAFAEDTG NVMGTTWPPR SYTCAFCRRE FRSAQALGGH  120
MNVHRRDRAR LHQVMPPPNS IINHHHPAAT AYASSSSSSS SSFLIPAREF VSANGTSGGL  180
CLVYPLPNPN YSAATFSSIN PPTNTALNAC TDHHQPSPSP SPSTLLSISP YLPGNLATGG  240
PRPPGAGSTS TSNYINAYRH RDEEPSDHSS HHDENGDEEE LDLELRLGHG PTPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.18e-32C2H2 family protein