PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON54353.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB_related | ||||||||
Protein Properties | Length: 358aa MW: 38551.1 Da PI: 7.2344 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.3 | 3.5e-13 | 116 | 160 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++lG+g+W+ Iar Rt+ q+ s+ qky PON54353.1 116 PWTEEEHRLFLIGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKY 160 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence |
MTRRCSHCSN NGHNSRTCPS RGGGSGSGSG SGSGSGGGGG LKLFGVRLID GSIIKKSASM 60 GNLSAHCHSS SSAAGSPNPE SPPSDPHHEP DCYLSDDPAH ASCSANRRGE RKKGVPWTEE 120 EHRLFLIGLQ KLGKGDWRGI ARNYVVSRTP TQVASHAQKY FIRQTNATRR KRRSSLFDMV 180 PDMVSDHPPV PEEDLLPSFN KIESDNKNSL PSLNLSLQSE FEPMEATHEA KTEEANEPMI 240 GSNGFSPMVP GFFPAYMPVP FPLWPSSAAP LDEERIAETP HHQVLKPIPI VAKEPVNVDE 300 LVGMSQLSLG EAERRHREPS PLSLKLLAEP SRQSAFHSNA PVSGSDLSEG KTSAIQAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16350.1 | 1e-106 | MYB_related family protein |