PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54283.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 387aa    MW: 42596.1 Da    PI: 5.0253
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54283.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-103133531055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  PON54283.1 313 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 353
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MESAGAFPDG DWMFSAEDLD LTPHFLGQCS FSPFDNINIE GSFNFGQSIP VYQNVSEVGG  60
VMSPTPHESL LFHTLDSLNS RLQHLSQESS CYSSSNSGTS IGGSQDNNYV NYNYSDSYDH  120
DYNPVTHNNI SNGISMPIFL MGGKNIINHD QSPCHVPSVS DTVMMGEENT TMICNTIKED  180
NSGNDNGNED KPLQPETSVV SSEELRLKRT YDVVDKVSPK KKPRVSRDVP KGKKNLKSQK  240
VGPNGKEEGM SINKGVEGHS SSSYSSEDDN ASQENTNGGE TSDVKSLSGA VNLNGKARAS  300
RGSATDPQSL YARKRRERIN ERLRILQNLV PNGTKVDIST MLEEAVHYVK FLQLQIKLLS  360
SDEMWMYAPI AYNGMDIGLQ QKISQLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.18e-44bHLH family protein