PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54281.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 267aa    MW: 28186.3 Da    PI: 8.6017
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54281.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.0004697119123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ C+k F++   L  H  +H
  PON54281.1  97 YKCSVCSKAFPSYQALGGHKASH 119
                 9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MALEALNSPT TATAPFHFED AANLHYLEPW AKRKRSKRSR LDQAAPTEEE YLALCLIMLA  60
RGGADQRQKL TPTRAPPVDQ TATTAATATT SATKLSYKCS VCSKAFPSYQ ALGGHKASHR  120
KGTGGVEDQP TSSTTTTTTT TTSAAAGARA SNGSGRAHEC SICHKTFPTG QALGGHKRCH  180
YEGGAASASA TAAGANSTLT TTSEGVGSTS HTAFSQSHRN FDLNLPALPE FSRDFFVSGD  240
DEVESPHPLK KIRLSISPPK IEIAEHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-59C2H2 family protein