PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON52634.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ERF

Protein Properties

Length: 458aa MW: 49303.7 Da PI: 6.6848

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON52634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.6	2.1e-20	221	270	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g PON52634.1 221 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 270 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MCLKVANQRS PNDVSFPPQE QGHGGEDQDE EQDQHNQQQQ RVNILSQYGV VSLPQPPPQQ 60 QQIFTGYSRP TEMSAIVSAL THVVSGRRGG DYWGYDSHLV GDVGSGQVYA SPSSSTSSSY 120 SPAFSGITSP GSGSGSWSGQ KRGRDEQASA QVRIESAPTR VFRGLGDFRA TPEESSSASA 180 TEEVTNTMTA TAAAATTAAI VPGMPSSETA QQEETGERRR RYRGVRQRPW GKWAAEIRDP 240 HKAARVWLGT FDTAEAAARA YDEAALRFRG NRAKLNFPEN VRSFPPPHQN SPAPAPTHLS 300 ISDSPATLVA AQPNLFQTTP FHGGGSSDTL RDYIQYSQLL QSSGDFSGQG QHLLQQQIPQ 360 QPSSFLEQML YSSQLASLQS PMMISSSSAA SSSLFRSSVS SSSSSSSVSY PLFFSSQLHQ 420 QQPGFYRSPE NQNPATSSSF PAPPWSSPPG YNPPSSSG

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MCLKVANQRS PNDVSFPPQE QGHGGEDQDE EQDQHNQQQQ RVNILSQYGV VSLPQPPPQQ  60
QQIFTGYSRP TEMSAIVSAL THVVSGRRGG DYWGYDSHLV GDVGSGQVYA SPSSSTSSSY  120
SPAFSGITSP GSGSGSWSGQ KRGRDEQASA QVRIESAPTR VFRGLGDFRA TPEESSSASA  180
TEEVTNTMTA TAAAATTAAI VPGMPSSETA QQEETGERRR RYRGVRQRPW GKWAAEIRDP  240
HKAARVWLGT FDTAEAAARA YDEAALRFRG NRAKLNFPEN VRSFPPPHQN SPAPAPTHLS  300
ISDSPATLVA AQPNLFQTTP FHGGGSSDTL RDYIQYSQLL QSSGDFSGQG QHLLQQQIPQ  360
QPSSFLEQML YSSQLASLQS PMMISSSSAA SSSLFRSSVS SSSSSSSVSY PLFFSSQLHQ  420
QQPGFYRSPE NQNPATSSSF PAPPWSSPPG YNPPSSSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	217	222	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50080.1	1e-13	ERF family protein