PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON51886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 29115.8 Da PI: 9.6891 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.4 | 4.8e-52 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evd++k++PwdLp e+e yfFs+r+ ky++g+r+nrat sgyWkatg dk+++++ +++ PON51886.1 14 LPPGFRFHPTDEELVVQYLKRKVFSYPLPA-SIIPEVDVCKSDPWDLPGD---LEQERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKQIVTSrGNH 108 79****************************.89***************54...46799*********************************99985778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kktLvfy+g+ p+g++tdW+mheyrl PON51886.1 109 VVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 138 8***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MEKLNFFKNG VLRLPPGFRF HPTDEELVVQ YLKRKVFSYP LPASIIPEVD VCKSDPWDLP 60 GDLEQERYFF STREAKYPNG NRSNRATGSG YWKATGIDKQ IVTSRGNHVV GMKKTLVFYR 120 GKPPHGSRTD WIMHEYRLVT NPQTKPSNGA PEKNTSQSPV VPMESWVLCR IFLKKRGSKN 180 EEENLQTGVD HAVVRKPGIY KPVFYDFMTK DRANLNLAPA SSSSGSSGIT EVSSNESDDH 240 EESSSCNSFP YFRRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-100 | NAC family protein |