PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON50894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | YABBY | ||||||||
Protein Properties | Length: 139aa MW: 15486.2 Da PI: 9.8633 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 140 | 2.7e-43 | 25 | 108 | 86 | 170 |
YABBY 86 vekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 v ++ s+s+ ++++ e+ d+e p+ pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl PON50894.1 25 VNESGSSSKCNNKNAAFESVDHEQPKSPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 108 33334444444444446778899999888.9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MGATLQTVAP QDPQKQIPVS SEDSVNESGS SSKCNNKNAA FESVDHEQPK SPPIRPPEKR 60 QRVPSAYNRF IKEEIQRIKA SNPDISHREA FSTAAKNWAH FPHIHFGLKL DGTNNKQAKL 120 DKTIAGDHHQ GTQKTNGFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 1e-50 | YABBY family protein |