PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON49776.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB_related

Protein Properties

Length: 630aa MW: 66645.6 Da PI: 5.8576

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON49776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.3	3.1e-07	199	243	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrw 44 r++W++ Ed l+ avk+ G g+W+ r g Rt+ q+ rw PON49776.1 199 RKPWSEAEDMELIAAVKKCGEGNWANMLR--GdfkGDRTASQLSQRW 243 789**********************9665..2334688888888888 PP

Sequence ? help Back to Top
Protein Sequence Length: 630 aa Download sequence
MIEKAKKQRK GSVGEEDIAT LLQRYTATTV LALLHEVANC TEVKIDWNAL VVNTSTGISN 60 AKEFQMLWRH LAYRHTLLEN FEDGDQPLDD DSDLEYELEA VPAVSTEAST EAAACVKVLI 120 ASGLPSDSIR SGSTVEAPLT INIPNGLSSR ALDQQSCSMQ GTNITVPVSV QKQPVPSATF 180 TDLDTNRSAV GNLQNRRKRK PWSEAEDMEL IAAVKKCGEG NWANMLRGDF KGDRTASQLS 240 QRWSIIRKRN GNLNLGGKSN GTQLSEAQLA ARHAMSVALK MPVKSITAGT TTTNSLARTN 300 SAGNSAITNA TKHSMLITGE TSMSGSSFLQ SLKQSQENLT SKTSPVGSLG PTAKSRVPLK 360 KPVLKSAPSS DAMVRATAVA AGARIASPSD AASLLKAAQA KNAVHIMPTG GGPVKSSMAT 420 SGMPTHSESH PNVHYIRTGL ASTPISTYPA ATPSASTPSS VKAIPPAVEH TPTVNGASLD 480 VRSKQNNDVS CTQACELPSK QTIKTEEISI SELGPPTKEQ IQGDQACISA NSEGELVKEN 540 KLASNAEDES VKENKVVASP DINVELKGTS EVGNLASSMN VMKAENANQV IVDVQPKGTE 600 IENDTEMIDS IAGAGDNHDA VEEDGENQDR

Sequence ? help Back to Top

Protein Sequence Length: 630 aa Download sequence

MIEKAKKQRK GSVGEEDIAT LLQRYTATTV LALLHEVANC TEVKIDWNAL VVNTSTGISN  60
AKEFQMLWRH LAYRHTLLEN FEDGDQPLDD DSDLEYELEA VPAVSTEAST EAAACVKVLI  120
ASGLPSDSIR SGSTVEAPLT INIPNGLSSR ALDQQSCSMQ GTNITVPVSV QKQPVPSATF  180
TDLDTNRSAV GNLQNRRKRK PWSEAEDMEL IAAVKKCGEG NWANMLRGDF KGDRTASQLS  240
QRWSIIRKRN GNLNLGGKSN GTQLSEAQLA ARHAMSVALK MPVKSITAGT TTTNSLARTN  300
SAGNSAITNA TKHSMLITGE TSMSGSSFLQ SLKQSQENLT SKTSPVGSLG PTAKSRVPLK  360
KPVLKSAPSS DAMVRATAVA AGARIASPSD AASLLKAAQA KNAVHIMPTG GGPVKSSMAT  420
SGMPTHSESH PNVHYIRTGL ASTPISTYPA ATPSASTPSS VKAIPPAVEH TPTVNGASLD  480
VRSKQNNDVS CTQACELPSK QTIKTEEISI SELGPPTKEQ IQGDQACISA NSEGELVKEN  540
KLASNAEDES VKENKVVASP DINVELKGTS EVGNLASSMN VMKAENANQV IVDVQPKGTE  600
IENDTEMIDS IAGAGDNHDA VEEDGENQDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.2	2e-60	MYB_related family protein