PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON49736.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 27391.6 Da PI: 9.6316

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON49736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	84	9.4e-27	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g+ KKA+ELS+LCdae+a+iifs tgkl+e+ss PON49736.1 9 KKIDNVTARQVTFSKRRRGLVKKAQELSILCDAEIALIIFSATGKLFEFSS 59 68***********************************************96 PP
2	K-box	39	3.5e-14	91	173	17	99
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++++ +L ke+ n ++R+++G dL ++l eL +Le++Le +l+++ ++K++ ++++i l +k e+ +en++L++kl+ PON49736.1 91 NNTNHMRLSKEVANKSLQLRQMMGVDLRGIKLDELLHLEKKLEAGLTRVLETKEKRFRTEIAALERKGAETIKENQQLKQKLM 173 4556778999999888899**************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MAREKIKIKK IDNVTARQVT FSKRRRGLVK KAQELSILCD AEIALIIFSA TGKLFEFSSS 60 SMKDLLARCE AQHNNHEKSD QLPSLELQLE NNTNHMRLSK EVANKSLQLR QMMGVDLRGI 120 KLDELLHLEK KLEAGLTRVL ETKEKRFRTE IAALERKGAE TIKENQQLKQ KLMMKLYSKG 180 KQHVVMGYSD KYAIDINNTV MEERMSSNDQ SAATNVCSCN SSNASLADDN SDTSLKLGLP 240 CSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	8e-64	MIKC_MADS family protein