PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON48795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 374aa MW: 42888.8 Da PI: 6.6731 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.3 | 0.00051 | 79 | 101 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H PON48795.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP | |||||||
2 | zf-C2H2 | 16.5 | 2.4e-05 | 106 | 130 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H PON48795.1 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP | |||||||
3 | zf-C2H2 | 21.7 | 5.3e-07 | 136 | 160 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH PON48795.1 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP | |||||||
4 | zf-C2H2 | 15.8 | 4e-05 | 166 | 190 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk++ + + Lk+Hi++H PON48795.1 166 HICPypECGKRYAHEYKLKNHISSH 190 679999******************6 PP | |||||||
5 | zf-C2H2 | 14.9 | 7.4e-05 | 231 | 256 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+Cp C k + + + Lk H+r+ H PON48795.1 231 YTCPyeGCEKAYIHEYKLKLHLRReH 256 9***********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 374 aa Download sequence |
METHFNHNLF ERRPILRSKT PAVKWFREWV PQDVVATGGK CLILKWVTED TLKALKEKTK 60 EPEVPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PECGKRYAHE 180 YKLKNHISSH HEKSGTVDVT KYTPTPPPEK PIKTTKPAAG VYGSASSDRP YTCPYEGCEK 240 AYIHEYKLKL HLRREHPGHT SDENAENPTT NADNEMDEGS DQDAYVGNRV NNGKSQKQNK 300 PKPSLKLPPA KIGQRKGSTP PPARVNVVKK PWPVKEVYEE DSEETEEEDR DNVENGWRYA 360 ANNEEDDEET EYED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 1e-135 | C2H2 family protein |