PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON48358.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | LBD | ||||||||
Protein Properties | Length: 217aa MW: 23412.5 Da PI: 9.0534 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 128.1 | 4.1e-40 | 24 | 124 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+k+C++apyf +eq +++fa+vhk+FGasn +kll +lp+++r da+ sl+yeA ar+rdPvyG+v++i++lq+q+ +l+aela+++ PON48358.1 24 PCGACKFLRRKCVKGCIFAPYFDSEQgTAHFAAVHKVFGASNASKLLLRLPPHKRLDAVVSLCYEALARIRDPVYGCVAHIFTLQHQVVNLQAELAYVQ 122 7***********************9989*********************************************************************99 PP DUF260 99 ee 100 ++ PON48358.1 123 AR 124 76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MNINGGSSSG SSGTGGGGGG SGGPCGACKF LRRKCVKGCI FAPYFDSEQG TAHFAAVHKV 60 FGASNASKLL LRLPPHKRLD AVVSLCYEAL ARIRDPVYGC VAHIFTLQHQ VVNLQAELAY 120 VQARLSTLQR LPPALPQSQS PSLTTNHILQ SSSNVISASN SSMHLDPLLH HHQQASTELT 180 SFYTNPIDDQ PIHDQDLHEL RRQLVSRGLR VRSSTSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45410.1 | 8e-53 | LBD family protein |