PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47565.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Trihelix
Protein Properties Length: 286aa    MW: 34115.4 Da    PI: 8.804
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix781.5e-2431111286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 W ++e+++Li++r+e+e+++   k+ k+lW++vs+ m ergf r+p qCk+kw+nl +ryk  ++++ ++     ++cp+fd+l+
  PON47565.1  31 WGQEETKELIRIRTELERDSTVVKRSKALWDAVSSMMLERGFIRTPDQCKCKWKNLLNRYKGKETSDPEN----GRQCPFFDELH 111
                 **************************************************************99999974....678******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MYGWGDDEKE RIRAMVMGPS AQGQGQGQGA WGQEETKELI RIRTELERDS TVVKRSKALW  60
DAVSSMMLER GFIRTPDQCK CKWKNLLNRY KGKETSDPEN GRQCPFFDEL HALFTERQKN  120
MQRLLLESEI GSPRSRKKMK KSSTSDDFSE NEENDQDETD EETPTRSNHR KRKTKKIALD  180
KSSKAANTAR AKSETEIQVM LKQFFQQQQR MEKQWMEMME RRAYEQQLFE QEWRQSMEKL  240
ERERLMMEQA WREREEQRRI REESRAERRD ALLTTLLNSL LGENNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.12e-24Trihelix family protein