PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON47405.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HD-ZIP

Protein Properties

Length: 295aa MW: 33737.5 Da PI: 6.0122

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON47405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.7	2.4e-19	64	115	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +q+++Le++Fe ++++ e++++LA++lgL+ rqV +WFqNrRa++k PON47405.1 64 RRLGMDQVKALEKHFEVENKLEPERKAKLADELGLQPRQVAIWFQNRRARWK 115 467789*********************************************9 PP
2	HD-ZIP_I/II	127.5	5.6e-41	62	153	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl +qvk+LE++Fe e+kLeperK++la eLglqprqva+WFqnrRAR+ktkq+Ekdy+ Lk++yd+lk + e+L++++e+Lr+++k+ PON47405.1 62 KKRRLGMDQVKALEKHFEVENKLEPERKAKLADELGLQPRQVAIWFQNRRARWKTKQMEKDYSLLKANYDSLKLSYEALQQQNEALRKQVKQ 153 9****************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MKRFGSSDSL GALISICAPK DATIVNAEEK YAVTNQEGYS KEFQAMLDSL DQEDCSEEFT 60 GKKRRLGMDQ VKALEKHFEV ENKLEPERKA KLADELGLQP RQVAIWFQNR RARWKTKQME 120 KDYSLLKANY DSLKLSYEAL QQQNEALRKQ VKQLKAKMCR EIEGSNQSIK EESPFSGHES 180 NADHTRENKA EFHETYGNYA KSKDGSSDSD SINGVTKEDH GKPEFSLGPK GSSSSSNSMK 240 NWIQISDNFS RAFSVKICQP QFMRMEDQTP FSSDESCNFF SVDQAPTLHW YFPEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	91	KKRRLGMDQVKALEKHFEVENKLEPERKAK
2	110	118	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	2e-55	HD-ZIP family protein