PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON47217.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 326aa MW: 36572.1 Da PI: 6.5062

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON47217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.6e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l +++q+G+++W++I++ g+ R++k+c++rw +yl PON47217.1 14 RGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL 61 89********************************************97 PP
2	Myb_DNA-binding	45.4	1.8e-14	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++ E++ +v+++ G++ W+ Ia+ ++ gRt++++k++w++ PON47217.1 68 GQFSEAEEQTIVKLHSIVGNR-WSIIAAQLP-GRTDNDVKNHWNT 110 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MGRIPCCEKD NVKRGQWTPE EDNKLSSYIA QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY 60 LRPDLKHGQF SEAEEQTIVK LHSIVGNRWS IIAAQLPGRT DNDVKNHWNT KLKKKLSGMG 120 IDPVTHKPFS HLMAEIATTL EPPQVAHLAE AALGCFKDEM LHLLTKRRID FQLQQSNASL 180 GNNTATHINS KQEEQDETIE KIKLGLSRAI QEPDMLPPNK LWDSSGPTFT NFAGTCSAFP 240 YSVSGFQYEP SSFSNERDGS PWNQSLCTGS TCTAGDQQGC LPDKLEENGE DSRAGKEITL 300 RDEPIIFNSD SVLWDLPSDD LMHPIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56110.1	1e-120	MYB family protein