PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON46678.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARF

Protein Properties

Length: 752aa MW: 82093.8 Da PI: 7.349

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON46678.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.7	2.5e-24	163	263	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k+lt sd++++g +++p++ ae++ ++++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + +++el++ PON46678.1 163 FCKTLTASDTSTHGGFSVPRRAAEDCfppldYNQPRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGEDGELRL 259 99**************************944566778*********************************************..4499999 PP EEE- CS B3 95 kvfr 98 ++++ PON46678.1 260 GIRK 263 9997 PP
2	Auxin_resp	122	4.3e-40	289	370	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +++a+st+s+F+ +YnPras+s F+++++k++k+l++++svGmRfkm+feted+serr++G+v+g+sd+dp+rWp+SkWr+L PON46678.1 289 VVNAISTRSAFNLYYNPRASSSAFIIPLRKFLKSLDHSFSVGMRFKMRFETEDASERRYTGLVTGISDMDPIRWPGSKWRCL 370 689******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MAGPGLIDLN TTEDDETPSS ASSASTSSPS ASASALTTWG ASSSTTSSPS SSSSVCLELW 60 HACAGPLISL PKKGSVVVYL PQGHLEQLSD YPAALCDLPP HLFCRVAHVK LHAEEGTDEV 120 YAQVSLVPES KQFEQKLREG EIDADGEEED MEAAVKSSTP HMFCKTLTAS DTSTHGGFSV 180 PRRAAEDCFP PLDYNQPRPS QELVAKDLHG LEWRFRHIYR GQPRRHLLTT GWSAFVNKKK 240 LVSGDAVLFL RGEDGELRLG IRKAAQIKGC ATFPTPFSQQ LNYSSMKDVV NAISTRSAFN 300 LYYNPRASSS AFIIPLRKFL KSLDHSFSVG MRFKMRFETE DASERRYTGL VTGISDMDPI 360 RWPGSKWRCL VVRWDDIDSN RHGRVSPWEI EPSGSVPSSA SIMAPGLKRT RIGLSSGKVE 420 FPVPNGIGAS DFRESLRFQK VLQGQEILGF DMPFDGIGTQ CPHPSETRRG FPGSNSSGIA 480 AMGNSVRNLH VHSDNITSGR IGFGESFRFH KVLQGQEIHP SSPRGRAPNA NEDSEYGGLG 540 IFDRGRVPSS GDGWSTIIQS SKAHCRTPVQ SLQVSSPSSV LMFQQAVNPV STFSSMQNNH 600 TLEEQRVTKR SSYASESNGG KLMPFSFSDR DISGEYHGAT KSLYLSSDCN QHSNSSPLTT 660 HPEFRSSQDV VSSCKSSCRL FGFSLTEENH LPSNEINSTP VSSSLNPGVS LFPNVGGQFH 720 TKPPLMTKAV GSNCTREMAF DWPGERLGYL KG

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MAGPGLIDLN TTEDDETPSS ASSASTSSPS ASASALTTWG ASSSTTSSPS SSSSVCLELW  60
HACAGPLISL PKKGSVVVYL PQGHLEQLSD YPAALCDLPP HLFCRVAHVK LHAEEGTDEV  120
YAQVSLVPES KQFEQKLREG EIDADGEEED MEAAVKSSTP HMFCKTLTAS DTSTHGGFSV  180
PRRAAEDCFP PLDYNQPRPS QELVAKDLHG LEWRFRHIYR GQPRRHLLTT GWSAFVNKKK  240
LVSGDAVLFL RGEDGELRLG IRKAAQIKGC ATFPTPFSQQ LNYSSMKDVV NAISTRSAFN  300
LYYNPRASSS AFIIPLRKFL KSLDHSFSVG MRFKMRFETE DASERRYTGL VTGISDMDPI  360
RWPGSKWRCL VVRWDDIDSN RHGRVSPWEI EPSGSVPSSA SIMAPGLKRT RIGLSSGKVE  420
FPVPNGIGAS DFRESLRFQK VLQGQEILGF DMPFDGIGTQ CPHPSETRRG FPGSNSSGIA  480
AMGNSVRNLH VHSDNITSGR IGFGESFRFH KVLQGQEIHP SSPRGRAPNA NEDSEYGGLG  540
IFDRGRVPSS GDGWSTIIQS SKAHCRTPVQ SLQVSSPSSV LMFQQAVNPV STFSSMQNNH  600
TLEEQRVTKR SSYASESNGG KLMPFSFSDR DISGEYHGAT KSLYLSSDCN QHSNSSPLTT  660
HPEFRSSQDV VSSCKSSCRL FGFSLTEENH LPSNEINSTP VSSSLNPGVS LFPNVGGQFH  720
TKPPLMTKAV GSNCTREMAF DWPGERLGYL KG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	0.0	ARF family protein