PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON45613.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 565aa    MW: 63174.3 Da    PI: 6.2394
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON45613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS366.92.7e-1121865641374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn......sseelaalklfsevsPilk 92 
                 lv+lL++cAeav+ +d+  a+ lL++l+ +a   g+++qR+a++f+++La rla  +  + +  ++p + ++++      s+++  +l+l +e++P ++
  PON45613.1 186 LVQLLIACAEAVACRDKLHASVLLSELRANALVFGSSFQRVASCFVQGLADRLAMvHPLGAVGFIAPAPPPTMSimdvgiSEKKEESLRLVYEICPHIQ 284
                 689***************************************************933334555567777766667778887788888899********* PP

        GRAS  93 fshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                 f+h++aN  Ilea+ege+ vH++D++++    +G QW aL+q+La+R+   ++p +lRiT+vg       e+ + +g+ L+ fA++lg+++ef+v v +
  PON45613.1 285 FGHFVANASILEAFEGESFVHVVDLGMTlglpHGHQWRALIQSLADRAtthQPPRRLRITAVGL----CDERFRIIGDELELFANTLGINLEFSV-VKT 378
                 ************************98873333788************99866677*********....9*************************9.799 PP

        GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                 +le+l+ ++++++ +E+laVn++lqlh +++es    +   +vL+++ +lsPkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ +  r+
  PON45613.1 379 HLENLSSNDIKTSDDEVLAVNSILQLHCVVKESRGALN---SVLQTIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRA 474
                 ******************************88877777...8********************************************************* PP

        GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 k+E++++++ei+n+++ceg +r+erhe++ +Wr+r+++aGF++ p++  +++qak  l++++  +gy++ ee+g+lvlgWk+rp+v++S+W+
  PON45613.1 475 KMEQFYFAEEIKNIISCEGPARVERHERVDQWRRRMSRAGFQAGPIK--MMAQAKQWLAQIEaCEGYTIVEEKGCLVLGWKSRPIVAASCWK 564
                 *********************************************96..789**********9****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 565 aa     Download sequence    
MVIGSFRALL NIPLNRERVS EREIQEMADI HRLLSKEYIN GERTKELGGH ELSLSAMAWY  60
PFPYMPLLEN RGYTLILPFS DENREHKRIK RVPSLPESIS SSATPTPNRG GGNINDSNDT  120
SNSCISRCSS TSSLSSMPSL QFRDHILTYT QRYLAAEVVE EAAEAIMGAN QENRGTEDGE  180
ADEMRLVQLL IACAEAVACR DKLHASVLLS ELRANALVFG SSFQRVASCF VQGLADRLAM  240
VHPLGAVGFI APAPPPTMSI MDVGISEKKE ESLRLVYEIC PHIQFGHFVA NASILEAFEG  300
ESFVHVVDLG MTLGLPHGHQ WRALIQSLAD RATTHQPPRR LRITAVGLCD ERFRIIGDEL  360
ELFANTLGIN LEFSVVKTHL ENLSSNDIKT SDDEVLAVNS ILQLHCVVKE SRGALNSVLQ  420
TIHELSPKVL VLVEQDSSHN GPFFLGRFME ALHYYSAIFD SLDAMLPKYD TRRAKMEQFY  480
FAEEIKNIIS CEGPARVERH ERVDQWRRRM SRAGFQAGPI KMMAQAKQWL AQIEACEGYT  540
IVEEKGCLVL GWKSRPIVAA SCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-75GRAS family protein