PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON44962.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Trihelix
Protein Properties Length: 504aa    MW: 57863.4 Da    PI: 6.3507
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON44962.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix96.42.5e-3051135187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW++qe+laL+e+r++m+ ++r+++ k+plWeevs+km + g++rs+k+Ckek+en+ k++k++++g++++++++   +++f+qlea
  PON44962.1  51 RWPRQETLALLEIRSDMDAKFRDSSIKAPLWEEVSRKMGQLGYNRSAKKCKEKFENIYKYHKRTRDGRSGKSNGKA--YRFFEQLEA 135
                 8********************************************************************9866665..*******85 PP
2trihelix104.39e-33342427187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW+k+ev aLi++r++++++++++  k+plWe++s +m++ g++rs+k+Ckekwen+nk++k++k+++kkr  e+s+tcpyf+ql+a
  PON44962.1 342 RWPKDEVDALIRLRTNLDTAYQENGPKGPLWEDISVAMKKLGYNRSAKRCKEKWENINKYFKRVKDSNKKR-VEDSKTCPYFHQLDA 427
                 8*********************************************************************8.78889********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    
MLENPTLPEN PSATNPGNGE VGDSVGSVPV GFGEEERLGA EDGDRSWLGN RWPRQETLAL  60
LEIRSDMDAK FRDSSIKAPL WEEVSRKMGQ LGYNRSAKKC KEKFENIYKY HKRTRDGRSG  120
KSNGKAYRFF EQLEALDHHS FDPSLSTSSE KVNFSLEETK TTTRSPTNVV INAIPCSIHK  180
PTTNFVYNSP SNSPSSSHES EGVRKKKRKL TQFFEKLMKE VTDRQEKLQR KFIETLEKCE  240
QERIAREEAW KMQELERIKR ESDLLVHERS VAAAKDAAVL AFLKKFSEQA DPVQFPENAI  300
AVGEKDADKQ EKHHGGNDEE IGLDTQEKLK NNRNFVQVSS SRWPKDEVDA LIRLRTNLDT  360
AYQENGPKGP LWEDISVAMK KLGYNRSAKR CKEKWENINK YFKRVKDSNK KRVEDSKTCP  420
YFHQLDALYN KKTKNVDDSL NSDYDLRPEE LLMHMMGGQE EQQQPETVTE NEESENLSHD  480
QGESEKVDGD GYKHTDHSSM EIMG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205210KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-71Trihelix family protein