PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON44406.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

AP2

Protein Properties

Length: 537aa MW: 58769 Da PI: 8.4572

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON44406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	7e-17	188	237	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PON44406.1 188 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 237 78*****************......55**********************997 PP
2	AP2	42.6	1.5e-13	280	330	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a++k +g PON44406.1 280 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSELEAARAYDKAALKCNG 330 89******.7**5553..2.26******99********99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MWDLNVNINI GADSTREKIE EVAEMVIMEV EKLPERSRAQ MEDSGSTGSS VVNGEIEAPS 60 NTTPSNGASR DEDSSNNINT SSSPAFVFDI LKKEEDGLAG AGAGKDWNIS ASGFVTRSLF 120 PVAGDNGGSR RHEAGSGGSS SSSRSQWLNL SFTGSGGGGT GQLPAELGVL QQKQQMKKSR 180 RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AHAAARAYDR AAIKFRGVDA 240 DINFNVSDYE EDMKQMRSLN KEEFVQILRR QSTGFSRGSS KYRGVTLHKC GRWEARMGQF 300 LGKKYIYLGL FDSELEAARA YDKAALKCNG REAVTNFEHS TYQGETMLDS NIQGSDHNLD 360 LNLGISPPSD GPKGNDYSFG DTSLHWNPRE VVNRIRPMID LQSSPHVLTP NHNTSATRNM 420 YPGFLPKHEV IRAITDHQHQ NRIEGATNSS PGFLNWAWKI HGNGSSTTTS SVTAMPVFSI 480 AASSRFSSST TLAAPSATSA INPHTNFVQN LCLNPSLPIG TIKSVTDNFH CSQIRRS

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MWDLNVNINI GADSTREKIE EVAEMVIMEV EKLPERSRAQ MEDSGSTGSS VVNGEIEAPS  60
NTTPSNGASR DEDSSNNINT SSSPAFVFDI LKKEEDGLAG AGAGKDWNIS ASGFVTRSLF  120
PVAGDNGGSR RHEAGSGGSS SSSRSQWLNL SFTGSGGGGT GQLPAELGVL QQKQQMKKSR  180
RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AHAAARAYDR AAIKFRGVDA  240
DINFNVSDYE EDMKQMRSLN KEEFVQILRR QSTGFSRGSS KYRGVTLHKC GRWEARMGQF  300
LGKKYIYLGL FDSELEAARA YDKAALKCNG REAVTNFEHS TYQGETMLDS NIQGSDHNLD  360
LNLGISPPSD GPKGNDYSFG DTSLHWNPRE VVNRIRPMID LQSSPHVLTP NHNTSATRNM  420
YPGFLPKHEV IRAITDHQHQ NRIEGATNSS PGFLNWAWKI HGNGSSTTTS SVTAMPVFSI  480
AASSRFSSST TLAAPSATSA INPHTNFVQN LCLNPSLPIG TIKSVTDNFH CSQIRRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-103	AP2 family protein