PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON43810.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 814aa    MW: 90027 Da    PI: 5.9293
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON43810.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-2088143156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  PON43810.1  88 KKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMK 143
                 688899***********************************************998 PP
2START149.23.7e-472895182206
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS...............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv..............dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                 la +  +el k+ ++++p+W +    eng evl  +e ++               +++ea r+++vv+m++ +l   +ld + +W   ++    +a+tl
  PON43810.1 289 LAMSSVNELAKMCQSGSPLWIRNG--ENGREVLNVEEHARMfpwamnlkqhdssgFKTEATRDTAVVIMNSITLIDAFLDGN-KWMDLFPsivsRAKTL 384
                 5667889**************999..********99998889****************************************.99999999999***** PP

                 EEECTT.......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
       START  83 evissg.......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvd 171
                 +vi+++       g lqlm+aelq+lsplvp R+  f+Ry++q  ++g+wv+vd  vds  +  + ++s+ R +++pSg++i++++ng+s+vtwveh++
  PON43810.1 385 QVITTDasgqplnGSLQLMFAELQFLSPLVPsREAHFLRYCQQnAEEGTWVVVDFPVDSFHDILQyQPSLPRYRRRPSGCVIQDMPNGYSRVTWVEHAE 483
                 ***********************************************************9999889********************************* PP

                 --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                  +++ +h  +  +v+sg+a+ga +w+a l+rqc++
  PON43810.1 484 IEEKPVHPTFSNFVHSGMAFGAHRWLAILKRQCQR 518
                 *********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 814 aa     Download sequence    
MSSIGGNVVS SETLFSSPIQ NPNFNFMSTM PYQPFSSILT SKDENGLLLR GKEEMLDSGS  60
GSEQMEDKSG NEENSSDQLL LQQQQGKKKR YHRHTARQIQ EMEALFKECP HPDDKQRMKL  120
SQELGLKPRQ VKFWFQNRRT QMKAQQDRSD NVILRAENDS LKNENYRLQA ALRNIMCPNC  180
GGQAMIGEIG LDEQQLRLEN ARLREELDRV CCLTSRYTGR SIQTMTPAAH HPLMPPSLDL  240
DMNMYSRHFP DPMGSCNDHN MVPIPMLSQE PFPDNGLLLE EEKTMAIELA MSSVNELAKM  300
CQSGSPLWIR NGENGREVLN VEEHARMFPW AMNLKQHDSS GFKTEATRDT AVVIMNSITL  360
IDAFLDGNKW MDLFPSIVSR AKTLQVITTD ASGQPLNGSL QLMFAELQFL SPLVPSREAH  420
FLRYCQQNAE EGTWVVVDFP VDSFHDILQY QPSLPRYRRR PSGCVIQDMP NGYSRVTWVE  480
HAEIEEKPVH PTFSNFVHSG MAFGAHRWLA ILKRQCQRVA SLMARNISDV GVIPSPEARK  540
NLMKLAQRMI RTFCVNIGTC GGQSWTALSD SPDDTVRITT RRITEPGQPN GLILSAVSTT  600
WLPYPHYQVF DLLRDERRRS QLEVLSNGNS LQEVAHIANG SDPGNCVSLL RINVANNSSQ  660
HVELMLQESC TDLSGSLVVC ATVDVDAIQL TMSGEDPSRI PILPLGFVMV PVELSSDDNS  720
AAANGLSPVP ASAFGKPSCL LTVGLQVLVS TIPSANPSLP SINAINNHLN NTVQQIMAAL  780
GGGTSTATTG VDNGGSGSSS GADLGTTTNA VPKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein