PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON43155.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 337aa    MW: 36495.5 Da    PI: 7.6795
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON43155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.42.8e-1299143347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
       PON43155.1  99 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 143
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKIFGVRL TDGSIRKSAS MGNLSHYTGS GSGALHNGSN  60
VPGSPGETPD HGAAADGYAS EDFVPGSSSS CRERKKGVPW TEEEHRMFLL GLQKLGKGDW  120
RGIARNYVIS RTPTQVASHA QKYFIRQTNV SRRKRRSSLF DIVADESADA PMVPRDFLSV  180
NHSQPEIHSD NTLPDPPALD EECESMDSTN SNDGEPAPPK LDNSSQSCYP VIYPAYISPF  240
FPFPVPFWSG YENNTEANKK ETHVVLKPTA VHSKSPIKVD ELVGMSKLSL GESIGHDGPS  300
PLSLKLLEGS SRQSAFHANP VSSSSNINSS GSPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-130MYB_related family protein